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48 matching publication(s)
Single-cell transcriptome maps of myeloid blood cell lineages in Drosophila.
PMID 32900993 · Nat Commun · 2020
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Alginate oligosaccharides improve germ cell development and testicular microenvironment to rescue busulfan disrupted spermatogenesis.
PMID 32194870 · Theranostics · 2020
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79/100
Identification of key genes in chickpea transcriptomics and the development of ChickpeaOmicsR as a comprehensive resource to advance breeding and genomic studie⚑
PMID 41909810 · Front Bioinform · 2026
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56/100
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Under the Shadow: Old-biased Genes Are Subject to Weak Purifying Selection at Both the Tissue- and Cell Type-Specific Levels.
PMID 41092135 · Genome Biol Evol · 2025
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E3RC: A step-by-step computational protocol for exploring enhancer RNA expression and regulation using conventional RNA-seq data.
PMID 40716058 · STAR Protoc · 2025
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FRMD8 inhibits tumor metastasis in BRCA1-associated TNBC by negatively regulating tmTNF-α.
PMID 40619383 · Cell Mol Biol Lett · 2025
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An engineered tumor organoid model reveals cellular identity and signaling trajectories underlying SFPQ-TFE3 driven translocation RCC.
PMID 40463960 · iScience · 2025
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88/100
Covalent binding of thioredoxin to TXNIP is required for diet-induced insulin resistance in the liver.
PMID 40345590 · J Biol Chem · 2025
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Data-driven projections of candidate enhancer-activating SNPs in immune regulation.
PMID 40011812 · BMC Genomics · 2025
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57/100
RSK1 is an exploitable dependency in myeloproliferative neoplasms and secondary acute myeloid leukemia.
PMID 39820365 · Nat Commun · 2025
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73/100
CD14loCD301b+ macrophages gathering as a proangiogenic marker in adipose tissues.
PMID 39645040 · J Lipid Res · 2024
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59/100
Community assessment of methods to deconvolve cellular composition from bulk gene expression.
PMID 39191725 · Nat Commun · 2024
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An atlas of the human liver diurnal transcriptome and its perturbation by hepatitis C virus infection.
PMID 39209804 · Nat Commun · 2024
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Characterizing Neutrophil Subtypes in Cancer Using scRNA Sequencing Demonstrates the Importance of IL1β/CXCR2 Axis in Generation of Metastasis-specific Neutroph
PMID 38358352 · Cancer Res Commun · 2024
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Transcriptomic and physiological analysis of atractylodes chinensis in response to drought stress reveals the putative genes related to sesquiterpenoid biosynth
PMID 38317086 · BMC Plant Biol · 2024
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A newly identified glycosyltransferase AsRCOM provides resistance to purple curl leaf disease in agave.
PMID 37936069 · BMC Genomics · 2023
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No data access
Single-cell transcriptomics and chromatin accessibility profiling elucidate the kidney-protective mechanism of mineralocorticoid receptor antagonists.
PMID 37906287 · J Clin Invest · 2024
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Application of Machine Learning in Predicting Hepatic Metastasis or Primary Site in Gastroenteropancreatic Neuroendocrine Tumors.⚑
PMID 37887568 · Curr Oncol · 2023
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Loss of CD4+ T cell-intrinsic arginase 1 accelerates Th1 response kinetics and reduces lung pathology during influenza infection.
PMID 37572656 · Immunity · 2023
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iBRIDGE: A Data Integration Method to Identify Inflamed Tumors from Single-cell RNA-Seq Data and Differentiate Cell Type-Specific Markers of Immune-Cell Infiltr
PMID 37023414 · Cancer Immunol Res · 2023
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Transcriptomic data meta-analysis reveals common and injury model specific gene expression changes in the regenerating zebrafish heart.
PMID 37012284 · Sci Rep · 2023
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Multiomic analysis of malignant pleural mesothelioma identifies molecular axes and specialized tumor profiles driving intertumor heterogeneity.
PMID 36928603 · Nat Genet · 2023
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Microglia-containing cerebral organoids derived from induced pluripotent stem cells for the study of neurological diseases.
PMID 36936782 · iScience · 2023
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74/100
A temporal classifier predicts histopathology state and parses acute-chronic phasing in inflammatory bowel disease patients.
PMID 36694043 · Commun Biol · 2023
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Perturbation of placental protein glycosylation by endoplasmic reticulum stress promotes maladaptation of maternal hepatic glucose metabolism.
PMID 36660474 · iScience · 2022
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The rates of adult neurogenesis and oligodendrogenesis are linked to cell cycle regulation through p27-dependent gene repression of SOX2.
PMID 36627412 · Cell Mol Life Sci · 2023
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Modulation of HERV Expression by Four Different Encephalitic Arboviruses during Infection of Human Primary Astrocytes.⚑
PMID 36423114 · Viruses · 2022
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56/100
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auts2 Features and Expression Are Highly Conserved during Evolution Despite Different Evolutionary Fates Following Whole Genome Duplication.
PMID 36078102 · Cells · 2022
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Transcriptomics, regulatory syntax, and enhancer identification in mesoderm-induced ESCs at single-cell resolution.⚑
PMID 35977485 · Cell Rep · 2022
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Global and precise identification of functional miRNA targets in mESCs by integrative analysis.
PMID 35899551 · EMBO Rep · 2022
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Analysis of the Hypoxic Response in a Mouse Cortical Collecting Duct-Derived Cell Line Suggests That Esrra Is Partially Involved in Hif1α-Mediated Hypoxia-Induc
PMID 35806266 · Int J Mol Sci · 2022
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Extensive transgressive gene expression in testis but not ovary in the homoploid hybrid Italian sparrow.
PMID 35726533 · Mol Ecol · 2022
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TFAP2 paralogs facilitate chromatin access for MITF at pigmentation and cell proliferation genes.
PMID 35580127 · PLoS Genet · 2022
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Itaconate and derivatives reduce interferon responses and inflammation in influenza A virus infection.
PMID 35025971 · PLoS Pathog · 2022
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95/100
Vascular adhesion protein-1 defines a unique subpopulation of human hematopoietic stem cells and regulates their proliferation.
PMID 34719737 · Cell Mol Life Sci · 2021
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50/100
Tbx5 drives Aldh1a2 expression to regulate a RA-Hedgehog-Wnt gene regulatory network coordinating cardiopulmonary development.
PMID 34643182 · Elife · 2021
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A HML6 endogenous retrovirus on chromosome 3 is upregulated in amyotrophic lateral sclerosis motor cortex.
PMID 34253796 · Sci Rep · 2021
84/100
Vaccine-induced ICOS+CD38+ circulating Tfh are sensitive biosensors of age-related changes in inflammatory pathway
PMID 34095875 · Cell Rep Med · 2021
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Prime editing in mice reveals the essentiality of a single base in driving tissue-specific gene expression.
PMID 33722289 · Genome Biol · 2021
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In vivo antiviral host transcriptional response to SARS-CoV-2 by viral load, sex, and age.
PMID 32898168 · PLoS Biol · 2020
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89/100
Plant Soft Rot Development and Regulation from the Viewpoint of Transcriptomic Profiling.⚑
PMID 32927917 · Plants (Basel) · 2020
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No data access
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Scalable Prediction of Acute Myeloid Leukemia Using High-Dimensional Machine Learning and Blood Transcriptomics.
PMID 31918046 · iScience · 2019
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mitoXplorer, a visual data mining platform to systematically analyze and visualize mitochondrial expression dynamics and mutations.
PMID 31799603 · Nucleic Acids Res · 2020
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89/100
Single-Cell Sequencing of iPSC-Dopamine Neurons Reconstructs Disease Progression and Identifies HDAC4 as a Regulator of Parkinson Cell Phenotypes.⚑
PMID 30503143 · Cell Stem Cell · 2018
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An open RNA-Seq data analysis pipeline tutorial with an example of reprocessing data from a recent Zika virus study.
PMID 27583132 · F1000Res · 2016
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