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26 matching publication(s)

Publication	Journal	Year	Score	Verdict
Targeting the epigenome and the integrated stress response to normalize colorectal cancer subclonal plasticity and progression. PMID 41963303	Cell Death Dis	2026	68	L1 68/100
Single-cell protein activity analysis reveals aberrant myogenesis and IGF2-PI3K pathway dependencies in MYOD1-mutant rhabdomyosarcoma. PMID 41758938	Sci Adv	2026	84	L1 84/100
Covalent binding of thioredoxin to TXNIP is required for diet-induced insulin resistance in the liver. PMID 40345590	J Biol Chem	2025	87	L1 87/100
The Drosophila estrogen-related receptor promotes triglyceride storage within the larval fat body. PMID 40288680	J Lipid Res	2025	88	L1 88/100
RSK1 is an exploitable dependency in myeloproliferative neoplasms and secondary acute myeloid leukemia. PMID 39820365	Nat Commun	2025	73	L1 73/100
Community assessment of methods to deconvolve cellular composition from bulk gene expression. PMID 39191725	Nat Commun	2024	63	L1 63/100
An atlas of the human liver diurnal transcriptome and its perturbation by hepatitis C virus infection. PMID 39209804	Nat Commun	2024	50	L1 50/100
Single-cell transcriptomics and chromatin accessibility profiling elucidate the kidney-protective mechanism of mineralocorticoid receptor antagonists. PMID 37906287	J Clin Invest	2024	95	L1 95/100
Loss of CD4+ T cell-intrinsic arginase 1 accelerates Th1 response kinetics and reduces lung pathology during influenza infection. PMID 37572656	Immunity	2023	68	L1 68/100
iBRIDGE: A Data Integration Method to Identify Inflamed Tumors from Single-cell RNA-Seq Data and Differentiate Cell Type-Specific Markers of Immune-Cell Infiltr PMID 37023414	Cancer Immunol Res	2023	94	L1 94/100
Multiomic analysis of malignant pleural mesothelioma identifies molecular axes and specialized tumor profiles driving intertumor heterogeneity. PMID 36928603	Nat Genet	2023	80	L1 80/100
Microglia-containing cerebral organoids derived from induced pluripotent stem cells for the study of neurological diseases. PMID 36936782	iScience	2023	74	L1 74/100
A temporal classifier predicts histopathology state and parses acute-chronic phasing in inflammatory bowel disease patients. PMID 36694043	Commun Biol	2023	83	L1 83/100
The rates of adult neurogenesis and oligodendrogenesis are linked to cell cycle regulation through p27-dependent gene repression of SOX2. PMID 36627412	Cell Mol Life Sci	2023	59	L1 59/100
Transcriptomics, regulatory syntax, and enhancer identification in mesoderm-induced ESCs at single-cell resolution. ⚑ PMID 35977485	Cell Rep	2022	63	L1 63/100 ⚑
TFAP2 paralogs facilitate chromatin access for MITF at pigmentation and cell proliferation genes. PMID 35580127	PLoS Genet	2022	95	L2 95/100
Betacoronavirus-specific alternate splicing. PMID 35074468	Genomics	2022	100	L1 100/100
Itaconate and derivatives reduce interferon responses and inflammation in influenza A virus infection. PMID 35025971	PLoS Pathog	2022	95	L1 95/100
Monocarboxylate Transporter-2 Expression Restricts Tumor Growth in a Murine Model of Lung Cancer: A Multi-Omic Analysis. ⚑ PMID 34638954	Int J Mol Sci	2021	53	L1 53/100 ⚑
DeepProg: an ensemble of deep-learning and machine-learning models for prognosis prediction using multi-omics data. PMID 34261540	Genome Med	2021	84	L1 84/100
Vaccine-induced ICOS+CD38+ circulating Tfh are sensitive biosensors of age-related changes in inflammatory pathway PMID 34095875	Cell Rep Med	2021	88	L1 88/100
PredTAD: A machine learning framework that models 3D chromatin organization alterations leading to oncogene dysregulation in breast cancer cell lines. PMID 34093998	Comput Struct Biotechnol J	2021	77	L1 77/100
Prime editing in mice reveals the essentiality of a single base in driving tissue-specific gene expression. PMID 33722289	Genome Biol	2021	66	L1 66/100
In vivo antiviral host transcriptional response to SARS-CoV-2 by viral load, sex, and age. PMID 32898168	PLoS Biol	2020	89	L1 89/100
Wx: a neural network-based feature selection algorithm for transcriptomic data. PMID 31324856	Sci Rep	2019	50	L1 50/100
An open RNA-Seq data analysis pipeline tutorial with an example of reprocessing data from a recent Zika virus study. PMID 27583132	F1000Res	2016	74	L1 74/100