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34 matching publication(s)

Publication	Journal	Year	Score	Verdict
Protocol for transcriptomic and epigenomic analysis of JAK inhibitor sensitivity in IFN-γ-primed human macrophages using ATAC-seq and RNA-seq. PMID 41313685	STAR Protoc	2025	85	L1 85/100
Macrophages on the run: Exercise balances macrophage polarization for improved health. PMID 39476967	Mol Metab	2024	81	L1 81/100
DNA binding analysis of rare variants in homeodomains reveals homeodomain specificity-determining residues. PMID 38600112	Nat Commun	2024	93	L1 93/100
GSDME-mediated pyroptosis promotes the progression and associated inflammation of atherosclerosis. PMID 36807553	Nat Commun	2023	85	85/100
CCL8 as a promising prognostic factor in diffuse large B-cell lymphoma via M2 macrophage interactions: A bioinformatic analysis of the tumor microenviron PMID 36072582	Front Immunol	2022	81	L1 81/100
Assessment of genotyping array performance for genome-wide association studies and imputation in African cattle. PMID 36057548	Genet Sel Evol	2022	90	L1 90/100
Stage-stratified molecular profiling of non-muscle-invasive bladder cancer enhances biological, clinical, and therapeutic insight. PMID 35028613	Cell Rep Med	2021	75	L1 75/100
Molecular Classification Models for Triple Negative Breast Cancer Subtype Using Machine Learning. PMID 34575658	J Pers Med	2021	86	L1 86/100
Identification of TYR, TYRP1, DCT and LARP7 as related biomarkers and immune infiltration characteristics of vitiligo via comprehensive strategies. PMID 34107850	Bioengineered	2021	55	L1 55/100
eVITTA: a web-based visualization and inference toolbox for transcriptome analysis. PMID 34019643	Nucleic Acids Res	2021	82	L1 82/100
Human methylome variation across Infinium 450K data on the Gene Expression Omnibus. PMID 33937763	NAR Genom Bioinform	2021	88	L1 88/100
GAUGE-Annotated Microbial Transcriptomic Data Facilitate Parallel Mining and High-Throughput Reanalysis To Form Data-Driven Hypotheses. PMID 33758032	mSystems	2021	70	L1 70/100
Evaluation of classification and forecasting methods on time series gene expression data. PMID 33156855	PLoS One	2020	74	L1 74/100
Colorectal Cancer Prediction Based on Weighted Gene Co-Expression Network Analysis and Variational Auto-Encoder. ⚑ PMID 32825264	Biomolecules	2020	80	L1 80/100 ⚑
Meta-analysis of gene expression profiles of lean and obese PCOS to identify differentially regulated pathways and risk of comorbidities. PMID 32695266	Comput Struct Biotechnol J	2020	78	L1 78/100
Unveiling prognostics biomarkers of tyrosine metabolism reprogramming in liver cancer by cross-platform gene expression analyses. ⚑ PMID 32542016	PLoS One	2020	51	L1 51/100 ⚑
An NMF-Based Methodology for Selecting Biomarkers in the Landscape of Genes of Heterogeneous Cancer-Associated Fibroblast Populations. PMID 32425511	Bioinform Biol Insights	2020	84	L1 84/100
miEAA 2.0: integrating multi-species microRNA enrichment analysis and workflow management systems. PMID 32374865	Nucleic Acids Res	2020	61	L1 61/100
Molecular and Clinical Relevance of ZBTB38 Expression Levels in Prostate Cancer. ⚑ PMID 32365491	Cancers (Basel)	2020	35	L1 35/100 ⚑
Equivalent change enrichment analysis: assessing equivalent and inverse change in biological pathways between diverse experiments. ⚑ PMID 32093613	BMC Genomics	2020	62	L1 62/100 ⚑
Scalable Prediction of Acute Myeloid Leukemia Using High-Dimensional Machine Learning and Blood Transcriptomics. PMID 31918046	iScience	2019	96	L1 96/100
Comparative profiling of skeletal muscle models reveals heterogeneity of transcriptome and metabolism. PMID 31825657	Am J Physiol Cell Physiol	2019	64	L1 64/100
Automatic discovery of 100-miRNA signature for cancer classification using ensemble feature selection. PMID 31533612	BMC Bioinformatics	2019	69	L1 69/100
Improved precision of epigenetic clock estimates across tissues and its implication for biological ageing. PMID 31443728	Genome Med	2019	68	L1 68/100
PI3K inhibitors protect against glucocorticoid-induced skin atrophy. PMID 30737086	EBioMedicine	2019	76	L1 76/100
DNA demethylation is associated with malignant progression of lower-grade gliomas. PMID 30760837	Sci Rep	2019	—	L1 No data access
Metabolite-Centric Reporter Pathway and Tripartite Network Analysis of Arabidopsis Under Cold Stress. PMID 30258841	Front Bioeng Biotechnol	2018	83	L1 83/100
Genome-wide identification of conserved and novel microRNAs in one bud and two tender leaves of tea plant (Camellia sinensis) by small RNA sequencing, microarra PMID 29157210	BMC Plant Biol	2017	91	L1 91/100
Newborn sex-specific transcriptome signatures and gestational exposure to fine particles: findings from the ENVIRONAGE birth cohort. PMID 28583124	Environ Health	2017	71	L1 71/100
CoINcIDE: A framework for discovery of patient subtypes across multiple datasets. PMID 26961683	Genome Med	2016	87	L1 87/100
Distinct lncRNA transcriptional fingerprints characterize progressive stages of multiple myeloma. ⚑ PMID 26895470	Oncotarget	2016	36	L1 36/100 ⚑
Gene-expression patterns in peripheral blood classify familial breast cancer susceptibility. PMID 26538066	BMC Med Genomics	2015	83	L1 83/100
Topologically inferring pathway activity toward precise cancer classification via integrating genomic and metabolomic data: prostate cancer as a case. PMID 26286638	Sci Rep	2015	76	L1 76/100
Cell Specific eQTL Analysis without Sorting Cells. PMID 25955312	PLoS Genet	2015	90	L1 90/100