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153 matching publication(s)
Automatic discovery of 100-miRNA signature for cancer classification using ensemble feature selection.
PMID 31533612 · BMC Bioinformatics · 2019
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69/100
Spatially clustered loci with multiple enhancers are frequent targets of HIV-1 integration.
PMID 31492853 · Nat Commun · 2019
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77/100
CRISPR/Cas9 Screens Reveal Multiple Layers of B cell CD40 Regulation.
PMID 31365872 · Cell Rep · 2019
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No data access
SMAC, a computational system to link literature, biomedical and expression data.
PMID 31324861 · Sci Rep · 2019
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50/100
Core transcriptional signatures of phase change in the migratory locust.⚑
PMID 31292921 · Protein Cell · 2019
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60/100
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Sister DNA Entrapment between Juxtaposed Smc Heads and Kleisin of the Cohesin Complex.
PMID 31201089 · Mol Cell · 2019
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64/100
pysradb: A Python package to query next-generation sequencing metadata and data from NCBI Sequence Read Archive.
PMID 31114675 · F1000Res · 2019
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90/100
Transcriptome maps of general eukaryotic RNA degradation factors.
PMID 31135339 · Elife · 2019
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60/100
pwrEWAS: a user-friendly tool for comprehensive power estimation for epigenome wide association studies (EWAS).
PMID 31035919 · BMC Bioinformatics · 2019
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88/100
Widespread nitrous oxide undersaturation in farm waterbodies creates an unexpected greenhouse gas sink.
PMID 31036633 · Proc Natl Acad Sci U S A · 2019
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87/100
Predicting enhancers in mammalian genomes using supervised hidden Markov models.
PMID 30917778 · BMC Bioinformatics · 2019
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70/100
Integrating herbarium specimen observations into global phenology data systems.
PMID 30937223 · Appl Plant Sci · 2019
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60/100
The exonuclease Xrn1 activates transcription and translation of mRNAs encoding membrane proteins.
PMID 30899024 · Nat Commun · 2019
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85/100
RNA structure maps across mammalian cellular compartments.⚑
PMID 30886404 · Nat Struct Mol Biol · 2019
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45/100
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CellFishing.jl: an ultrafast and scalable cell search method for single-cell RNA sequencing.
PMID 30744683 · Genome Biol · 2019
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97/100
PI3K inhibitors protect against glucocorticoid-induced skin atrophy.
PMID 30737086 · EBioMedicine · 2019
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76/100
The effect of 16S rRNA region choice on bacterial community metabarcoding results.
PMID 30720800 · Sci Data · 2019
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59/100
DNA demethylation is associated with malignant progression of lower-grade gliomas.
PMID 30760837 · Sci Rep · 2019
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No data access
Repression of Divergent Noncoding Transcription by a Sequence-Specific Transcription Factor.
PMID 30576656 · Mol Cell · 2018
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No data access
Trans-ethnic association study of blood pressure determinants in over 750,000 individuals.
PMID 30578418 · Nat Genet · 2018
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No data access
Complete Genome Sequencing of Lactobacillus plantarum ZLP001, a Potential Probiotic That Enhances Intestinal Epithelial Barrier Function and Defense Agai
PMID 30542296 · Front Physiol · 2018
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Yap1 safeguards mouse embryonic stem cells from excessive apoptosis during differentiation.
PMID 30561326 · Elife · 2018
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50/100
Single-Cell Sequencing of iPSC-Dopamine Neurons Reconstructs Disease Progression and Identifies HDAC4 as a Regulator of Parkinson Cell Phenotypes.⚑
PMID 30503143 · Cell Stem Cell · 2018
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30/100
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Transcriptomic and functional analyses of the piRNA pathway in the Chagas disease vector Rhodnius prolixus.
PMID 30303955 · PLoS Negl Trop Dis · 2018
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94/100
Genomic Description of 'Candidatus Abyssubacteria,' a Novel Subsurface Lineage Within the Candidate Phylum Hydrogenedentes.
PMID 30210471 · Front Microbiol · 2018
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91/100
miRge 2.0 for comprehensive analysis of microRNA sequencing data.
PMID 30153801 · BMC Bioinformatics · 2018
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89/100
Metabolite-Centric Reporter Pathway and Tripartite Network Analysis of Arabidopsis Under Cold Stress.
PMID 30258841 · Front Bioeng Biotechnol · 2018
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83/100
Immuno-detection by sequencing enables large-scale high-dimensional phenotyping in cells.
PMID 29921844 · Nat Commun · 2018
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96/100
Expansion of the SOS regulon of Vibrio cholerae through extensive transcriptome analysis and experimental validation.
PMID 29783948 · BMC Genomics · 2018
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85/100
The Cohesin Ring Uses Its Hinge to Organize DNA Using Non-topological as well as Topological Mechanisms.
PMID 29754816 · Cell · 2018
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80/100
Verrucomicrobia are prevalent in north-temperate freshwater lakes and display class-level preferences between lake habitats.
PMID 29590198 · PLoS One · 2018
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Invasive bacterial disease trends and characterization of group B streptococcal isolates among young infants in southern Mozambique, 2001-2015.
PMID 29351318 · PLoS One · 2018
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97/100
Numb prevents a complete epithelial-mesenchymal transition by modulating Notch signalling.
PMID 29187638 · J R Soc Interface · 2017
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49/100
Benefit from decline: the primary transcriptome of Alteromonas macleodii str. Te101 during Trichodesmium demise.⚑
PMID 29335641 · ISME J · 2018
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No data access
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Viral Diagnostics in Plants Using Next Generation Sequencing: Computational Analysis in Practice.
PMID 29123534 · Front Plant Sci · 2017
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100/100
Genome-wide identification of conserved and novel microRNAs in one bud and two tender leaves of tea plant (Camellia sinensis) by small RNA sequencing, microarra
PMID 29157210 · BMC Plant Biol · 2017
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91/100
Genome-wide prediction of DNase I hypersensitivity using gene expression.
PMID 29051481 · Nat Commun · 2017
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79/100
Large-Scale Phylogenomics of the Lactobacillus casei Group Highlights Taxonomic Inconsistencies and Reveals Novel Clade-Associated Features.
PMID 28845461 · mSystems · 2017
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94/100
Analysis of the genome of the New Zealand giant collembolan (Holacanthella duospinosa) sheds light on hexapod evolution.
PMID 29041914 · BMC Genomics · 2017
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Activity of distinct growth factor receptor network components in breast tumors uncovers two biologically relevant subtypes.
PMID 28446242 · Genome Med · 2017
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92/100
Distributed biotin-streptavidin transcription roadblocks for mapping cotranscriptional RNA folding.
PMID 28398514 · Nucleic Acids Res · 2017
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Identification and Characterization of Small Noncoding RNAs in Genome Sequences of the Edible Fungus Pleurotus ostreatus.
PMID 27703969 · Biomed Res Int · 2016
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A robust data scaling algorithm to improve classification accuracies in biomedical data.
PMID 27612635 · BMC Bioinformatics · 2016
87/100
Exposure to the widely used herbicide atrazine results in deregulation of global tissue-specific RNA transcription in the third generation and is associated wit⚑
PMID 27655631 · Nucleic Acids Res · 2016
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10/100
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An open RNA-Seq data analysis pipeline tutorial with an example of reprocessing data from a recent Zika virus study.
PMID 27583132 · F1000Res · 2016
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74/100
CoINcIDE: A framework for discovery of patient subtypes across multiple datasets.
PMID 26961683 · Genome Med · 2016
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87/100
Phylogenetic analysis of higher-level relationships within Hydroidolina (Cnidaria: Hydrozoa) using mitochondrial genome data and insight into their mitochondria⚑
PMID 26618080 · PeerJ · 2015
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68/100
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Topologically inferring pathway activity toward precise cancer classification via integrating genomic and metabolomic data: prostate cancer as a case.
PMID 26286638 · Sci Rep · 2015
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76/100