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76 matching publication(s)
Differential Hsp90-dependent gene expression is strain-specific and common among yeast strains.
PMID 37138775 · iScience · 2023
100/100
Cancer-cell-secreted miR-204-5p induces leptin signalling pathway in white adipose tissue to promote cancer-associated cachexia.
PMID 37620316 · Nat Commun · 2023
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85/100
Cross-species comparative hippocampal transcriptomics in Alzheimer's disease.
PMID 38292167 · iScience · 2023
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75/100
ResnetAge: A Resnet-Based DNA Methylation Age Prediction Method.
PMID 38247911 · Bioengineering (Basel) · 2023
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75/100
A novel oxidative stress-related gene signature as an indicator of prognosis and immunotherapy responses in HNSCC.
PMID 38157249 · Aging (Albany NY) · 2023
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Integrative analysis reveals chemokines CCL2 and CXCL5 mediated shear stress-induced aortic dissection formation.
PMID 38163105 · Heliyon · 2023
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75/100
Benefit of using interaction effects for the analysis of high-dimensional time-response or dose-response data for two-group comparisons.
PMID 38012163 · Sci Rep · 2023
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92/100
Hierarchical classification-based pan-cancer methylation analysis to classify primary cancer.
PMID 38066424 · BMC Bioinformatics · 2023
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Interpretable prediction models for widespread m6A RNA modification across cell lines and tissues.
PMID 37995291 · Bioinformatics · 2023
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A systems-level analysis of the mutually antagonistic roles of RKIP and BACH1 in dynamics of cancer cell plasticity.
PMID 37963558 · J R Soc Interface · 2023
95/100
Constructing an APOBEC-related gene signature with predictive value in the overall survival and therapeutic sensitivity in lung adenocarcinoma.
PMID 37954334 · Heliyon · 2023
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Stemness genes and miR-1247-3p expression associate with clinicopathological parameters and prognosis in lung adenocarcinoma.
PMID 37948380 · PLoS One · 2023
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Exploring microproteins from various model organisms using the mip-mining database.
PMID 37919660 · BMC Genomics · 2023
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Identification of immune-related signatures and pathogenesis differences between thoracic aortic aneurysm patients with bicuspid versus tricuspid valves via wei
PMID 37883426 · PLoS One · 2023
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Enterotoxins A and B produced by Staphylococcus aureus increase cell proliferation, invasion and cytarabine resistance in acute myeloid leukemia cell lin
PMID 37810000 · Heliyon · 2023
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88/100
Complete human day 14 post-implantation embryo models from naive ES cells.
PMID 37673118 · Nature · 2023
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100/100
Lineage commitment of dermal fibroblast progenitors is controlled by Kdm6b-mediated chromatin demethylation.
PMID 37602956 · EMBO J · 2023
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91/100
Identification of a novel lncRNA prognostic signature and analysis of functional lncRNA AC115619.1 in hepatocellular carcinoma.
PMID 37614318 · Front Pharmacol · 2023
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87/100
Mural cell-derived chemokines provide a protective niche to safeguard vascular macrophages and limit chronic inflammation.
PMID 37652021 · Immunity · 2023
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83/100
spotter: a single-nucleotide resolution stochastic simulation model of supercoiling-mediated transcription and translation in prokaryotes.
PMID 37602419 · Nucleic Acids Res · 2023
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77/100
Genetics of circulating inflammatory proteins identifies drivers of immune-mediated disease risk and therapeutic targets.
PMID 37563310 · Nat Immunol · 2023
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93/100
Exploring the key genetic association between chronic pancreatitis and pancreatic ductal adenocarcinoma through integrated bioinformatics.
PMID 37501719 · Front Genet · 2023
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91/100
Graph Random Forest: A Graph Embedded Algorithm for Identifying Highly Connected Important Features.
PMID 37509188 · Biomolecules · 2023
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89/100
Gene signature discovery and systematic validation across diverse clinical cohorts for TB prognosis and response to treatment.
PMID 37471455 · PLoS Comput Biol · 2023
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Systematic Assessment of Small RNA Profiling in Human Extracellular Vesicles.
PMID 37444556 · Cancers (Basel) · 2023
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High DNA methylation age deceleration defines an aggressive phenotype with immunoexclusion environments in endometrial carcinoma.
PMID 37388735 · Front Immunol · 2023
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76/100
Generation of LexA enhancer-trap lines in Drosophila by an international scholastic network.
PMID 37279923 · G3 (Bethesda) · 2023
94/100
A multiple super-enhancer region establishes inter-TAD interactions and controls Hoxa function in cranial neural crest.
PMID 37277355 · Nat Commun · 2023
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FAM3C/ILEI protein is elevated in psoriatic lesions and triggers psoriasiform hyperproliferation in mice.
PMID 37226685 · EMBO Mol Med · 2023
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Improving the annotation of the cattle genome by annotating transcription start sites in a diverse set of tissues and populations using Cap Analysis Gene Expres
PMID 37216666 · G3 (Bethesda) · 2023
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86/100
TransOrGAN: An Artificial Intelligence Mapping of Rat Transcriptomic Profiles between Organs, Ages, and Sexes.
PMID 37200521 · Chem Res Toxicol · 2023
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Intrinsic suppression of type I interferon production underlies the therapeutic efficacy of IL-15-producing natural killer cells in B-cell acute lymphoblastic l
PMID 37217248 · J Immunother Cancer · 2023
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Colocalization and potential interactions of Endozoicomonas and chlamydiae in microbial aggregates of the coral Pocillopora acuta<
PMID 37196086 · Sci Adv · 2023
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85/100
Evaluation of core genome and whole genome multilocus sequence typing schemes for Campylobacter jejuni and Campylobacter coli outbreak detection i
PMID 37133905 · Microb Genom · 2023
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92/100
Chromosome-level genome assembly of Lilford's wall lizard, Podarcis lilfordi (Günther, 1874) from the Balearic Islands (Spain).
PMID 37137526 · DNA Res · 2023
85/100
VirPipe: an easy-to-use and customizable pipeline for detecting viral genomes from Nanopore sequencing.
PMID 37129547 · Bioinformatics · 2023
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83/100
Single duplex DNA sequencing with CODEC detects mutations with high sensitivity.
PMID 37106072 · Nat Genet · 2023
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78/100
Predicting the pathogenicity of missense variants using features derived from AlphaFold2.
PMID 37084271 · Bioinformatics · 2023
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85/100
Improved eukaryotic detection compatible with large-scale automated analysis of metagenomes.
PMID 37032329 · Microbiome · 2023
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89/100
The selection of software and database for metagenomics sequence analysis impacts the outcome of microbial profiling and pathogen detection.
PMID 37027361 · PLoS One · 2023
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86/100
transXpress: a Snakemake pipeline for streamlined de novo transcriptome assembly and annotation.
PMID 37016291 · BMC Bioinformatics · 2023
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iBRIDGE: A Data Integration Method to Identify Inflamed Tumors from Single-cell RNA-Seq Data and Differentiate Cell Type-Specific Markers of Immune-Cell Infiltr
PMID 37023414 · Cancer Immunol Res · 2023
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Chemical and genomic characterization of a potential probiotic treatment for stony coral tissue loss disease.
PMID 37024599 · Commun Biol · 2023
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TrEMOLO: accurate transposable element allele frequency estimation using long-read sequencing data combining assembly and mapping-based approaches.
PMID 37013657 · Genome Biol · 2023
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89/100
Niche Modification by Sulfate-Reducing Bacteria Drives Microbial Community Assembly in Anoxic Marine Sediments.
PMID 36988509 · mBio · 2023
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Transcriptomic data meta-analysis reveals common and injury model specific gene expression changes in the regenerating zebrafish heart.
PMID 37012284 · Sci Rep · 2023
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90/100
Prioritized mass spectrometry increases the depth, sensitivity and data completeness of single-cell proteomics.
PMID 37012480 · Nat Methods · 2023
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nf-core/isoseq: simple gene and isoform annotation with PacBio Iso-Seq long-read sequencing.
PMID 36961337 · Bioinformatics · 2023
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88/100
Multiomic analysis of malignant pleural mesothelioma identifies molecular axes and specialized tumor profiles driving intertumor heterogeneity.
PMID 36928603 · Nat Genet · 2023
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An improved assembly of the pearl millet reference genome using Oxford Nanopore long reads and optical mapping.
PMID 36891809 · G3 (Bethesda) · 2023
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90/100