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37 matching publication(s)

Publication	Journal	Year	Score	Verdict
Benefit of using interaction effects for the analysis of high-dimensional time-response or dose-response data for two-group comparisons. PMID 38012163	Sci Rep	2023	92	L1 92/100
Complete human day 14 post-implantation embryo models from naive ES cells. PMID 37673118	Nature	2023	100	L1 100/100
Lineage commitment of dermal fibroblast progenitors is controlled by Kdm6b-mediated chromatin demethylation. PMID 37602956	EMBO J	2023	91	L1 91/100
Mural cell-derived chemokines provide a protective niche to safeguard vascular macrophages and limit chronic inflammation. PMID 37652021	Immunity	2023	83	L1 83/100
Genetics of circulating inflammatory proteins identifies drivers of immune-mediated disease risk and therapeutic targets. PMID 37563310	Nat Immunol	2023	93	L1 93/100
High DNA methylation age deceleration defines an aggressive phenotype with immunoexclusion environments in endometrial carcinoma. PMID 37388735	Front Immunol	2023	76	L1 76/100
Generation of LexA enhancer-trap lines in Drosophila by an international scholastic network. PMID 37279923	G3 (Bethesda)	2023	94	94/100
A multiple super-enhancer region establishes inter-TAD interactions and controls Hoxa function in cranial neural crest. PMID 37277355	Nat Commun	2023	94	L1 94/100
FAM3C/ILEI protein is elevated in psoriatic lesions and triggers psoriasiform hyperproliferation in mice. PMID 37226685	EMBO Mol Med	2023	83	L1 83/100
Improving the annotation of the cattle genome by annotating transcription start sites in a diverse set of tissues and populations using Cap Analysis Gene Expres PMID 37216666	G3 (Bethesda)	2023	86	L1 86/100
TransOrGAN: An Artificial Intelligence Mapping of Rat Transcriptomic Profiles between Organs, Ages, and Sexes. PMID 37200521	Chem Res Toxicol	2023	84	L1 84/100
Colocalization and potential interactions of Endozoicomonas and chlamydiae in microbial aggregates of the coral Pocillopora acuta&lt PMID 37196086	Sci Adv	2023	85	L1 85/100
Evaluation of core genome and whole genome multilocus sequence typing schemes for Campylobacter jejuni and Campylobacter coli outbreak detection i PMID 37133905	Microb Genom	2023	92	L1 92/100
Chromosome-level genome assembly of Lilford's wall lizard, Podarcis lilfordi (Günther, 1874) from the Balearic Islands (Spain). PMID 37137526	DNA Res	2023	85	85/100
VirPipe: an easy-to-use and customizable pipeline for detecting viral genomes from Nanopore sequencing. PMID 37129547	Bioinformatics	2023	83	L1 83/100
Single duplex DNA sequencing with CODEC detects mutations with high sensitivity. PMID 37106072	Nat Genet	2023	78	L1 78/100
Predicting the pathogenicity of missense variants using features derived from AlphaFold2. PMID 37084271	Bioinformatics	2023	85	L1 85/100
Improved eukaryotic detection compatible with large-scale automated analysis of metagenomes. PMID 37032329	Microbiome	2023	89	L1 89/100
transXpress: a Snakemake pipeline for streamlined de novo transcriptome assembly and annotation. PMID 37016291	BMC Bioinformatics	2023	95	L1 95/100
TrEMOLO: accurate transposable element allele frequency estimation using long-read sequencing data combining assembly and mapping-based approaches. PMID 37013657	Genome Biol	2023	89	L1 89/100
Transcriptomic data meta-analysis reveals common and injury model specific gene expression changes in the regenerating zebrafish heart. PMID 37012284	Sci Rep	2023	90	L2 90/100
Prioritized mass spectrometry increases the depth, sensitivity and data completeness of single-cell proteomics. PMID 37012480	Nat Methods	2023	90	L1 90/100
nf-core/isoseq: simple gene and isoform annotation with PacBio Iso-Seq long-read sequencing. PMID 36961337	Bioinformatics	2023	88	L1 88/100
Multiomic analysis of malignant pleural mesothelioma identifies molecular axes and specialized tumor profiles driving intertumor heterogeneity. PMID 36928603	Nat Genet	2023	80	L1 80/100
An improved assembly of the pearl millet reference genome using Oxford Nanopore long reads and optical mapping. PMID 36891809	G3 (Bethesda)	2023	90	L1 90/100
genomepy: genes and genomes at your fingertips. PMID 36882164	Bioinformatics	2023	97	L1 97/100
Assessing the impacts of COVID-19 vaccination programme's timing and speed on health benefits, cost-effectiveness, and relative affordability in 27 African coun PMID 36882868	BMC Med	2023	89	L1 89/100
Whole-genome sequencing of cryopreserved resources from French Large White pigs at two distinct sampling times reveals strong signatures of convergent and diver PMID 36864379	Genet Sel Evol	2023	100	L2 100/100
Shifts from cooperative to individual-based predation defense determine microbial predator-prey dynamics. PMID 36854789	ISME J	2023	84	L1 84/100
Enteroendocrine cell lineages that differentially control feeding and gut motility. PMID 36810133	Elife	2023	88	L1 88/100
Identification of genes influencing the evolution of Escherichia coli ST372 in dogs and humans. PMID 36752777	Microb Genom	2023	89	L1 89/100
nf-core/circrna: a portable workflow for the quantification, miRNA target prediction and differential expression analysis of circular RNAs. PMID 36694127	BMC Bioinformatics	2023	76	L1 76/100
Genomic insight into the influence of selection, crossbreeding, and geography on population structure in poultry. PMID 36670351	Genet Sel Evol	2023	100	L1 100/100
Critical Role for the Human Cytomegalovirus Major Immediate Early Proteins in Recruitment of RNA Polymerase II and H3K27Ac To an Enhancer-Like Element in Ori PMID 36645269	Microbiol Spectr	2023	93	93/100
A network-guided protocol to discover susceptibility genes in genome-wide association studies using stability selection. PMID 36609152	STAR Protoc	2023	92	L1 92/100
MirDIP 5.2: tissue context annotation and novel microRNA curation. PMID 36453996	Nucleic Acids Res	2023	89	L1 89/100
Genetic Variants in ARHGEF6 Cause Congenital Anomalies of the Kidneys and Urinary Tract in Humans, Mice, and Frogs. PMID 36414417	—	2023	85	L1 85/100