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499 matching publication(s)
Accurate sequence variant genotyping in cattle using variation-aware genome graphs.⚑
PMID 31092189 · Genet Sel Evol · 2019
L1
45/100
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Parsimonious Gene Correlation Network Analysis (PGCNA): a tool to define modular gene co-expression for refined molecular stratification in cancer.
PMID 30993001 · NPJ Syst Biol Appl · 2019
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71/100
PanglaoDB: a web server for exploration of mouse and human single-cell RNA sequencing data.
PMID 30951143 · Database (Oxford) · 2019
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80/100
Predicting enhancers in mammalian genomes using supervised hidden Markov models.
PMID 30917778 · BMC Bioinformatics · 2019
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70/100
A genome-wide association analysis identifies 16 novel susceptibility loci for carpal tunnel syndrome.
PMID 30833571 · Nat Commun · 2019
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90/100
The exonuclease Xrn1 activates transcription and translation of mRNAs encoding membrane proteins.
PMID 30899024 · Nat Commun · 2019
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85/100
The effect of 16S rRNA region choice on bacterial community metabarcoding results.
PMID 30720800 · Sci Data · 2019
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59/100
Genomic approaches used to investigate an atypical outbreak of Salmonella Adjame.
PMID 30648934 · Microb Genom · 2019
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100/100
SMAGEXP: a galaxy tool suite for transcriptomics data meta-analysis.
PMID 30698691 · Gigascience · 2019
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82/100
First step toward gene expression data integration: transcriptomic data acquisition with COMMAND>_.⚑
PMID 30691411 · BMC Bioinformatics · 2019
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30/100
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GC-biased gene conversion conceals the prediction of the nearly neutral theory in avian genomes.
PMID 30616647 · Genome Biol · 2019
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96/100
Repression of Divergent Noncoding Transcription by a Sequence-Specific Transcription Factor.
PMID 30576656 · Mol Cell · 2018
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No data access
Trans-ethnic association study of blood pressure determinants in over 750,000 individuals.
PMID 30578418 · Nat Genet · 2018
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No data access
Single-Cell Sequencing of iPSC-Dopamine Neurons Reconstructs Disease Progression and Identifies HDAC4 as a Regulator of Parkinson Cell Phenotypes.⚑
PMID 30503143 · Cell Stem Cell · 2018
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30/100
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Firefly genomes illuminate parallel origins of bioluminescence in beetles.
PMID 30324905 · Elife · 2018
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93/100
Immuno-detection by sequencing enables large-scale high-dimensional phenotyping in cells.
PMID 29921844 · Nat Commun · 2018
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96/100
MetaMap: an atlas of metatranscriptomic reads in human disease-related RNA-seq data.
PMID 29901703 · Gigascience · 2018
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95/100
Cancer cells copy migratory behavior and exchange signaling networks via extracellular vesicles.
PMID 29907695 · EMBO J · 2018
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46/100
Expansion of the SOS regulon of Vibrio cholerae through extensive transcriptome analysis and experimental validation.
PMID 29783948 · BMC Genomics · 2018
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85/100
The Cohesin Ring Uses Its Hinge to Organize DNA Using Non-topological as well as Topological Mechanisms.
PMID 29754816 · Cell · 2018
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80/100
Nimbus: a design-driven analyses suite for amplicon-based NGS data.
PMID 29538618 · Bioinformatics · 2018
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64/100
Invasive bacterial disease trends and characterization of group B streptococcal isolates among young infants in southern Mozambique, 2001-2015.
PMID 29351318 · PLoS One · 2018
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97/100
Benefit from decline: the primary transcriptome of Alteromonas macleodii str. Te101 during Trichodesmium demise.⚑
PMID 29335641 · ISME J · 2018
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No data access
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Viral Diagnostics in Plants Using Next Generation Sequencing: Computational Analysis in Practice.
PMID 29123534 · Front Plant Sci · 2017
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100/100
Large-Scale Phylogenomics of the Lactobacillus casei Group Highlights Taxonomic Inconsistencies and Reveals Novel Clade-Associated Features.
PMID 28845461 · mSystems · 2017
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94/100
A cross-species approach to identify transcriptional regulators exemplified for Dnajc22 and Hnf4a.
PMID 28642491 · Sci Rep · 2017
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76/100
Analysis of the genome of the New Zealand giant collembolan (Holacanthella duospinosa) sheds light on hexapod evolution.
PMID 29041914 · BMC Genomics · 2017
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72/100
Cell fixation and preservation for droplet-based single-cell transcriptomics.
PMID 28526029 · BMC Biol · 2017
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91/100
Newborn sex-specific transcriptome signatures and gestational exposure to fine particles: findings from the ENVIRONAGE birth cohort.
PMID 28583124 · Environ Health · 2017
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71/100
Metavisitor, a Suite of Galaxy Tools for Simple and Rapid Detection and Discovery of Viruses in Deep Sequence Data.
PMID 28045932 · PLoS One · 2017
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78/100
Bayesian prediction of RNA translation from ribosome profiling.⚑
PMID 28126919 · Nucleic Acids Res · 2017
62/100
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Genome of the Asian longhorned beetle (Anoplophora glabripennis), a globally significant invasive species, reveals key functional and evolutionary innovations a
PMID 27832824 · Genome Biol · 2016
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84/100
Roar: detecting alternative polyadenylation with standard mRNA sequencing libraries.
PMID 27756200 · BMC Bioinformatics · 2016
75/100
Evidence for L1-associated DNA rearrangements and negligible L1 retrotransposition in glioblastoma multiforme.
PMID 27843499 · Mob DNA · 2016
67/100
Exposure to the widely used herbicide atrazine results in deregulation of global tissue-specific RNA transcription in the third generation and is associated wit⚑
PMID 27655631 · Nucleic Acids Res · 2016
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10/100
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Representing and querying disease networks using graph databases.
PMID 27462371 · BioData Min · 2016
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77/100
Gene-Expression Profiling Suggests Impaired Signaling via the Interferon Pathway in Cstb-/- Microglia.⚑
PMID 27355630 · PLoS One · 2016
54/100
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Distinct lncRNA transcriptional fingerprints characterize progressive stages of multiple myeloma.⚑
PMID 26895470 · Oncotarget · 2016
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36/100
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The Genomic Aftermath of Hybridization in the Opportunistic Pathogen Candida metapsilosis.
PMID 26517373 · PLoS Genet · 2015
56/100
Conservation and losses of non-coding RNAs in avian genomes.
PMID 25822729 · PLoS One · 2015
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100/100
A 1-bp duplication in TGFB2 in three family members with a syndromic form of thoracic aortic aneurysm.
PMID 24193348 · European Journal of Human Genetics · 2014
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83/100
SnakeMAGs: a simple, efficient, flexible and scalable workflow to reconstruct prokaryotic genomes from metagenomes.
PMID 36875992 · F1000Res · 2022
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67/100
Long-read nanopore shotgun metagenomic DNA sequencing for river biodiversity, wildlife, pollution, and environmental health monitoring.
PMID 42038409 · NAR Genom Bioinform · 2026
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78/100
nf-core/mag: a best-practice pipeline for metagenome hybrid assembly and binning.
PMID 35118380 · NAR Genom Bioinform · 2022
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100/100
Time course profiling of host cell response to herpesvirus infection using nanopore and synthetic long-read transcriptome sequencing.
PMID 34244540 · Sci Rep · 2021
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50/100
Predicting favorable landing pads for targeted integrations in Chinese hamster ovary cell lines by learning stability characteristics from random transgene inte
PMID 33304461 · Comput Struct Biotechnol J · 2020
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