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23 matching publication(s)
Ecotype diversity and conversion in Photobacterium profundum strains.
PMID 24824441 · PLoS One · 2014
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77/100
A comprehensive resource of genomic, epigenomic and transcriptomic sequencing data for the black truffle Tuber melanosporum.⚑
PMID 25392735 · Gigascience · 2014
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61/100
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An extensive evaluation of read trimming effects on Illumina NGS data analysis.
PMID 24376861 · PLoS One · 2013
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85/100
Identification of a PRDM1-regulated T cell network to regulate atherosclerotic plaque inflammation.
PMID 41039608 · Genome Med · 2025
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100/100
A blood-based DNA damage signature in patients with Parkinson's disease is associated with disease progression.
PMID 40913219 · Nat Aging · 2025
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69/100
MACanalyzeR scRNAseq analysis tool reveals PPARγHIGH/GDF15HIGH lipid-associated macrophages facilitate thermogenic⚑
PMID 40450001 · Nat Commun · 2025
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70/100
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The Multi-State Epigenetic Pacemaker enables the identification of combinations of factors that influence DNA methylation.
PMID 39549198 · Geroscience · 2024
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54/100
Community assessment of methods to deconvolve cellular composition from bulk gene expression.
PMID 39191725 · Nat Commun · 2024
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63/100
An atlas of the human liver diurnal transcriptome and its perturbation by hepatitis C virus infection.
PMID 39209804 · Nat Commun · 2024
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50/100
Fast, accurate, and racially unbiased pan-cancer tumor-only variant calling with tabular machine learning.⚑
PMID 36611079 · NPJ Precis Oncol · 2023
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No data access
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Extensive androgen receptor enhancer heterogeneity in primary prostate cancers underlies transcriptional diversity and metastatic potential.
PMID 36450752 · Nat Commun · 2022
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70/100
Differentially expressed genes reflect disease-induced rather than disease-causing changes in the transcriptome.
PMID 34561431 · Nat Commun · 2021
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100/100
RNAdetector: a free user-friendly stand-alone and cloud-based system for RNA-Seq data analysis.
PMID 34082707 · BMC Bioinformatics · 2021
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85/100
Diapause vs. reproductive programs: transcriptional phenotypes in a keystone copepod.⚑
PMID 33782539 · Commun Biol · 2021
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57/100
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Circulating mucosal-associated invariant T cells identify patients responding to anti-PD-1 therapy.
PMID 33723257 · Nat Commun · 2021
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70/100
Interaction between SNAI2 and MYOD enhances oncogenesis and suppresses differentiation in Fusion Negative Rhabdomyosarcoma.
PMID 33420019 · Nat Commun · 2021
50/100
In vivo antiviral host transcriptional response to SARS-CoV-2 by viral load, sex, and age.
PMID 32898168 · PLoS Biol · 2020
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89/100
PulmonDB: a curated lung disease gene expression database.⚑
PMID 31949184 · Sci Rep · 2020
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53/100
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Histone hyperacetylation disrupts core gene regulatory architecture in rhabdomyosarcoma.⚑
PMID 31784732 · Nat Genet · 2019
58/100
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CRISPR/Cas9 Screens Reveal Multiple Layers of B cell CD40 Regulation.
PMID 31365872 · Cell Rep · 2019
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No data access
First step toward gene expression data integration: transcriptomic data acquisition with COMMAND>_.⚑
PMID 30691411 · BMC Bioinformatics · 2019
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30/100
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Trans-ethnic association study of blood pressure determinants in over 750,000 individuals.
PMID 30578418 · Nat Genet · 2018
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No data access