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540 matching publication(s)
A case study for large-scale human microbiome analysis using JCVI's metagenomics reports (METAREP).
PMID 22719821 · PLoS One · 2012
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78/100
Digital sorting of complex tissues for cell type-specific gene expression profiles.
PMID 23497278 · BMC Bioinformatics · 2013
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85/100
Hobbes: optimized gram-based methods for efficient read alignment.
PMID 22199254 · Nucleic Acids Res · 2011
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83/100
Extensive variation between chromosomes of North American and European hop.
PMID 42204144 · Nat Commun · 2026
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87/100
An integrated single-cell and spatial proteotranscriptomics atlas of fibroblast-driven immunoregulation within the human adult oral cavity.
PMID 42147490 · Cell Press Blue · 2026
85/100
CD74 deficiency protects against doxorubicin cardiotoxicity through RRM2-mediated regulation of ferroptosis.⚑
PMID 42180553 · Acta Pharm Sin B · 2026
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29/100
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Sediment Resuspension as a System-Wide Driver of Legacy and Bioavailable Phosphorus Release in Lake Erie.
PMID 41960750 · Environ Sci Technol · 2026
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90/100
Targeting the epigenome and the integrated stress response to normalize colorectal cancer subclonal plasticity and progression.
PMID 41963303 · Cell Death Dis · 2026
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68/100
Hippo signaling differentially regulates distal progenitor subpopulations and their transitional states to construct the mammalian lungs.
PMID 41932885 · Nat Commun · 2026
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91/100
A conserved glycan motif induces broadly reactive functional antibodies against the zoonotic pathogen Streptococcus suis.
PMID 41880495 · Sci Adv · 2026
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77/100
Endothelial Adgrl2 Expression and Alternative Splicing Controls the Cerebrovasculature.
PMID 41876233 · J Neurosci · 2026
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75/100
Metatranscriptomics-based investigation of bacterial community dynamics across a dissolved organic matter gradient in southern Lake Michigan.
PMID 41860215 · Appl Environ Microbiol · 2026
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81/100
Endogenous retroviral elements LTR8B and MER65 rewire PSG9 regulation to control trophoblast syncytialization and pre-eclampsia risk.
PMID 41796334 · Genome Biol · 2026
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68/100
ZAP targets aberrant mRNA transcripts encoding proteins with defective signal peptides for degradation.
PMID 41820617 · EMBO J · 2026
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50/100
FOXM1 inhibitor, RCM‑1, enhances venetoclax mediated apoptosis through downregulation of ATP2B4 in rhabdomyosarcoma.⚑
PMID 41789627 · Int J Oncol · 2026
10/100
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Exploring Gene Expression Patterns in Alzheimer's Disease Using a Human Microarray Data Meta-Analysis.
PMID 41744654 · Biology (Basel) · 2026
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100/100
Single-cell protein activity analysis reveals aberrant myogenesis and IGF2-PI3K pathway dependencies in MYOD1-mutant rhabdomyosarcoma.
PMID 41758938 · Sci Adv · 2026
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84/100
Inter- and Intraspecific Venom Variation in the Reclusive Rear-Fanged Black-Striped Snakes (Coniophanes).
PMID 41745774 · Toxins (Basel) · 2026
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No data access
Population structure analysis of Salmonella serovar Muenchen to redefine geno-serotyping using genome indexing approaches.⚑
PMID 41743541 · Front Microbiol · 2026
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54/100
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Evolution of Highly Repetitive Silk Genes in the Luna Moth, Actias luna.
PMID 41738778 · Genome Biol Evol · 2026
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89/100
Spatial transcriptomics reveals the molecular signatures of prodromal and advanced α-synucleinopathy.
PMID 41736854 · iScience · 2026
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70/100
stDyer-image improves clustering analysis of spatially resolved transcriptomics and proteomics with morphological images.
PMID 41692960 · Bioinformatics · 2026
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75/100
DMN-seq enriches DNA hypomethylated regions for biomarker discovery using 5-methylcytosine glycosylase.
PMID 41673887 · Genome Biol · 2026
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80/100
Identity rather than 3D position informs splicing of rare introns in the human genome.
PMID 41561379 · iScience · 2025
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98/100
Distinct sympathetic projections to brown fat regulate thermogenesis and glucose tolerance.
PMID 41559445 · Nat Metab · 2026
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85/100
A Meta-Analysis of the Effects of Chronic Stress on the Prefrontal Transcriptome in Animal Models and Convergence With Existing Human Data.
PMID 41566898 · Brain Behav · 2026
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64/100
Accurate chromatin marks peak calling with Omnipeak.
PMID 41521664 · Nucleic Acids Res · 2026
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77/100
Investigating epigenetic biomarkers of age, sex, and disease in captive South African cheetahs (Acinonyx jubatus jubatus).
PMID 41528985 · PLoS One · 2026
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58/100
A network-based model of Aspergillus fumigatus elucidates regulators of development and defensive natural products of an opportunistic pathogen.
PMID 41505094 · Nucleic Acids Res · 2026
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78/100
Early life-stage thermal resilience is determined by climate-linked regulatory variation.
PMID 41505517 · Proc Natl Acad Sci U S A · 2026
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64/100
Manual curation for improved genome annotation of the functionally extinct northern white rhinoceros (Ceratotherium simum cottoni).
PMID 41490125 · PLoS One · 2026
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69/100
Assembly of Macromolecular Complexes in the Whole-Cell Model of a Minimal Cell.
PMID 41427637 · J Phys Chem B · 2025
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67/100
Advances in genomic and pharmacokinetic profiling for clinical stratification of metastatic breast cancer.
PMID 41369820 · Discov Oncol · 2025
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59/100
Widespread mono- and oligoadenylation direct small noncoding RNA maturation versus degradation fates.
PMID 41350938 · EMBO J · 2025
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78/100
Microglial Fkbp5 Impairs Post-Stroke Vascular Integrity and Regeneration by Promoting Yap1-Mediated Glycolysis and Oxidative Phosphorylation.
PMID 41355597 · Adv Sci (Weinh) · 2025
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50/100
MUTACLASH: identifying functional small RNA target sites using crosslinking-induced mutations.
PMID 41330639 · RNA · 2026
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30/100
Smart spatial omics (S2-omics) optimizes region of interest selection to capture molecular heterogeneity in diverse tissues.
PMID 41298871 · Nat Cell Biol · 2025
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100/100
A four-gene signature from blood to exclude bacterial etiology of lower respiratory tract infection in adults.
PMID 41285807 · Nat Commun · 2025
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94/100
Directly observing the magnetic rope contraction and expansion in space.⚑
PMID 41298493 · Nat Commun · 2025
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61/100
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BiRNA-BERT allows efficient RNA language modeling with adaptive tokenization.
PMID 41266599 · Commun Biol · 2025
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50/100
Plasmid transmission dynamics and evolution of partner quality in a natural population of Rhizobium leguminosarum.
PMID 41212030 · mBio · 2025
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86/100
Recombination events restored the functional horned haplotypes in the offspring of polled parents.
PMID 41174470 · Genet Sel Evol · 2025
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98/100
Cell type- and species-specific regulation of hepatic lncRNAs by TCDD-activated aryl hydrocarbon receptor.
PMID 41136526 · Sci Rep · 2025
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71/100
Distinct senotypes in p16- and p21-positive cells across human and mouse aging tissues.
PMID 41162753 · EMBO J · 2025
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50/100
Missense variants in human forkhead transcription factors reveal determinants of forkhead DNA bispecificity.
PMID 41124077 · Cell Rep · 2025
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92/100
Single-cell dissection of chronic lung allograft dysfunction reveals convergent and distinct fibrotic mechanisms.
PMID 41122970 · JCI Insight · 2025
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75/100
DeepRNA-Reg: a deep-learning based approach for comparative analysis of CLIP experiments.
PMID 41055236 · RNA Biol · 2025
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100/100
Genomics Define Malignant Transformation in Myeloma Precursor Conditions.
PMID 41061199 · J Clin Oncol · 2025
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78/100
Identification of a PRDM1-regulated T cell network to regulate atherosclerotic plaque inflammation.
PMID 41039608 · Genome Med · 2025
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100/100