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24 matching publication(s)

Publication	Journal	Year	Score	Verdict
Transcriptome analysis reveals differential splicing events in IPF lung tissue. PMID 24647608	PLoS One	2014	81	L1 81/100
Detecting DNA modifications from SMRT sequencing data by modeling sequence context dependence of polymerase kinetic. ⚑ PMID 23516341	PLoS Comput Biol	2013	44	L1 44/100 ⚑
ChIP-seq guidelines and practices of the ENCODE and modENCODE consortia. PMID 22955991	Genome Res	2012	74	L1 74/100
RSK1 is an exploitable dependency in myeloproliferative neoplasms and secondary acute myeloid leukemia. PMID 39820365	Nat Commun	2025	73	L1 73/100
Community assessment of methods to deconvolve cellular composition from bulk gene expression. PMID 39191725	Nat Commun	2024	63	L1 63/100
An atlas of the human liver diurnal transcriptome and its perturbation by hepatitis C virus infection. PMID 39209804	Nat Commun	2024	50	L1 50/100
Generation of LexA enhancer-trap lines in Drosophila by an international scholastic network. PMID 37279923	G3 (Bethesda)	2023	94	94/100
Intrinsic suppression of type I interferon production underlies the therapeutic efficacy of IL-15-producing natural killer cells in B-cell acute lymphoblastic l PMID 37217248	J Immunother Cancer	2023	76	L1 76/100
Multiomic analysis of malignant pleural mesothelioma identifies molecular axes and specialized tumor profiles driving intertumor heterogeneity. PMID 36928603	Nat Genet	2023	80	L1 80/100
A feed-forward pathway drives LRRK2 kinase membrane recruitment and activation. PMID 36149401	Elife	2022	50	L1 50/100
Genome scans of facial features in East Africans and cross-population comparisons reveal novel associations. PMID 34411106	PLoS Genet	2021	—	L1 No data access
Profiling chromatin accessibility responses in human neutrophils with sensitive pathogen detection. ⚑ PMID 34145026	Life Sci Alliance	2021	54	L1 54/100 ⚑
Vaccine-induced ICOS+CD38+ circulating Tfh are sensitive biosensors of age-related changes in inflammatory pathway PMID 34095875	Cell Rep Med	2021	88	L1 88/100
Sustainable data analysis with Snakemake. PMID 34035898	F1000Res	2021	71	L1 71/100
The oncogene AAMDC links PI3K-AKT-mTOR signaling with metabolic reprograming in estrogen receptor-positive breast cancer. PMID 33772001	Nat Commun	2021	85	L1 85/100
Discovery and functional interrogation of SARS-CoV-2 RNA-host protein interactions. PMID 33743211	Cell	2021	84	L1 84/100
Metabolic profiling during malaria reveals the role of the aryl hydrocarbon receptor in regulating kidney injury. PMID 33021470	Elife	2020	62	L1 62/100
A crowdsourced set of curated structural variants for the human genome. PMID 32559231	PLoS Comput Biol	2020	71	L1 71/100
miEAA 2.0: integrating multi-species microRNA enrichment analysis and workflow management systems. PMID 32374865	Nucleic Acids Res	2020	61	L1 61/100
RNA structure maps across mammalian cellular compartments. ⚑ PMID 30886404	Nat Struct Mol Biol	2019	45	L1 45/100 ⚑
Trans-ethnic association study of blood pressure determinants in over 750,000 individuals. PMID 30578418	Nat Genet	2018	—	L1 No data access
Predicting position along a looping immune response trajectory. PMID 30296270	PLoS One	2018	98	L1 98/100
Single-cell transcriptional dynamics of flavivirus infection. PMID 29451494	Elife	2018	90	L1 90/100
CoINcIDE: A framework for discovery of patient subtypes across multiple datasets. PMID 26961683	Genome Med	2016	87	L1 87/100