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17 matching publication(s)

Publication	Journal	Year	Score	Verdict
Transcriptome analysis reveals differential splicing events in IPF lung tissue. PMID 24647608	PLoS One	2014	81	L1 81/100
Using random walks to identify cancer-associated modules in expression data. ⚑ PMID 24128261	BioData Min	2013	—	not yet assessed
ChIP-seq guidelines and practices of the ENCODE and modENCODE consortia. PMID 22955991	Genome Res	2012	74	L1 74/100
Leveraging RNA-seq deconvolution to improve complex in vitro model characterization. PMID 40701251	J Biol Chem	2025	67	L1 67/100
COVID-19 vaccination atlas using an integrative systems vaccinology approach. PMID 40456760	NPJ Vaccines	2025	69	L1 69/100
Cotranscriptional RNA strand exchange underlies the gene regulation mechanism in a purine-sensing transcriptional riboswitch. PMID 35348734	Nucleic Acids Res	2022	91	L1 91/100
Severe COVID-19 Shares a Common Neutrophil Activation Signature with Other Acute Inflammatory States. PMID 35269470	Cells	2022	88	L2 88/100
Comprehensive characterization of the antibody responses to SARS-CoV-2 Spike protein finds additional vaccine-induced epitopes beyond those for mild infection. ⚑ PMID 35072628	Elife	2022	57	L1 57/100 ⚑
High-resolution profiling of pathways of escape for SARS-CoV-2 spike-binding antibodies. PMID 34010620	Cell	2021	87	L1 87/100
geneshot: gene-level metagenomics identifies genome islands associated with immunotherapy response. PMID 33952321	Genome Biol	2021	75	L1 75/100
Interaction between SNAI2 and MYOD enhances oncogenesis and suppresses differentiation in Fusion Negative Rhabdomyosarcoma. PMID 33420019	Nat Commun	2021	50	50/100
Fractional ridge regression: a fast, interpretable reparameterization of ridge regression. PMID 33252656	Gigascience	2020	84	L1 84/100
PD-1 and TIGIT coexpression identifies a circulating CD8 T cell subset predictive of response to anti-PD-1 therapy. PMID 33188038	J Immunother Cancer	2020	75	L1 75/100
In vivo antiviral host transcriptional response to SARS-CoV-2 by viral load, sex, and age. PMID 32898168	PLoS Biol	2020	89	L1 89/100
Trans-ethnic association study of blood pressure determinants in over 750,000 individuals. PMID 30578418	Nat Genet	2018	—	L1 No data access
Wide-Open: Accelerating public data release by automating detection of overdue datasets. PMID 28594819	PLoS Biol	2017	74	L1 74/100
GAVISUNK: genome assembly validation via inter-SUNK distances in Oxford Nanopore reads. PMID 36321867	Bioinformatics	2023	67	L1 67/100