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Exploration of the shared diagnostic genes and molecular mechanism between obesity and atherosclerosis via bioinformatic analysis.
PMID 39825072 · Sci Rep · 2025
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76/100
Identification and validation of a metabolic-related gene risk model predicting the prognosis of lung, colon, and breast cancers.
PMID 39779736 · Sci Rep · 2025
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74/100
CD14loCD301b+ macrophages gathering as a proangiogenic marker in adipose tissues.
PMID 39645040 · J Lipid Res · 2024
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59/100
Comprehensive analysis of transcriptomics and radiomics revealed the potential of TEDC2 as a diagnostic marker for lung adenocarcinoma.
PMID 39553728 · PeerJ · 2024
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80/100
RummaGEO: Automatic mining of human and mouse gene sets from GEO.
PMID 39569206 · Patterns (N Y) · 2024
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63/100
Charting and probing the activity of ADARs in human development and cell-fate specification.
PMID 39537590 · Nat Commun · 2024
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100/100
The Multi-State Epigenetic Pacemaker enables the identification of combinations of factors that influence DNA methylation.
PMID 39549198 · Geroscience · 2024
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54/100
A comparative analysis of blastoid models through single-cell transcriptomics.
PMID 39524369 · iScience · 2024
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60/100
Protocol for the generation of single-nuclei RNA-seq libraries and quantification of heterogeneous cell types activated during social interaction.
PMID 39423127 · STAR Protoc · 2024
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78/100
Comprehensive data for studying serum exosome microRNA transcriptome in Parkinson's disease patients.
PMID 39406833 · Sci Data · 2024
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100/100
Partial correlation network analysis identifies coordinated gene expression within a regional cluster of COPD genome-wide association signals.⚑
PMID 39418301 · PLoS Comput Biol · 2024
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23/100
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Exploring the prognostic and diagnostic value of lactylation-related genes in sepsis.
PMID 39367086 · Sci Rep · 2024
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73/100
Community assessment of methods to deconvolve cellular composition from bulk gene expression.
PMID 39191725 · Nat Commun · 2024
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63/100
Machine learning-based identification of biomarkers and drugs in immunologically cold and hot pancreatic adenocarcinomas.
PMID 39152432 · J Transl Med · 2024
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42/100
Mapping the Development of Human Spermatogenesis Using Transcriptomics-Based Data: A Scoping Review.
PMID 39000031 · Int J Mol Sci · 2024
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No computation
Forseti: a mechanistic and predictive model of the splicing status of scRNA-seq reads.
PMID 38940130 · Bioinformatics · 2024
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87/100
DeepGSEA: explainable deep gene set enrichment analysis for single-cell transcriptomic data.
PMID 38950178 · Bioinformatics · 2024
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40/100
Single-cell multiomics profiling reveals heterogeneous transcriptional programs and microenvironment in DSRCTs.
PMID 38781959 · Cell Rep Med · 2024
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76/100
DNA binding analysis of rare variants in homeodomains reveals homeodomain specificity-determining residues.
PMID 38600112 · Nat Commun · 2024
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93/100
Constructing eRNA-mediated gene regulatory networks to explore the genetic basis of muscle and fat-relevant traits in pigs.
PMID 38594607 · Genet Sel Evol · 2024
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100/100
Identifying human pre-mRNA cleavage and polyadenylation factors by genome-wide CRISPR screens using a dual fluorescence readthrough reporter.
PMID 38587191 · Nucleic Acids Res · 2024
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68/100
Decoding and reconstructing disease relations between dry eye and depression: a multimodal investigation comprising meta-analysis, genetic pathways and Mendelia
PMID 38548265 · J Adv Res · 2024
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79/100
Identification of the shared hub gene signatures and molecular mechanisms between HIV-1 and pulmonary arterial hypertension.
PMID 38528047 · Sci Rep · 2024
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71/100
Comprehensive analysis of m6A methylome alterations after azacytidine plus venetoclax treatment for acute myeloid leukemia by nanopore sequencing.
PMID 38510975 · Comput Struct Biotechnol J · 2024
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No data access
Gbdmr: identifying differentially methylated CpG regions in the human genome via generalized beta regressions.⚑
PMID 38443825 · BMC Bioinformatics · 2024
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62/100
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Design of a targeted blood transcriptional panel for monitoring immunological changes accompanying pregnancy.
PMID 38352867 · Front Immunol · 2024
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73/100
Transcriptome and machine learning analysis of the impact of COVID-19 on mitochondria and multiorgan damage.
PMID 38295140 · PLoS One · 2024
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71/100
ResnetAge: A Resnet-Based DNA Methylation Age Prediction Method.
PMID 38247911 · Bioengineering (Basel) · 2023
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75/100
Refining breast cancer biomarker discovery and drug targeting through an advanced data-driven approach.
PMID 38253993 · BMC Bioinformatics · 2024
59/100
Benefit of using interaction effects for the analysis of high-dimensional time-response or dose-response data for two-group comparisons.
PMID 38012163 · Sci Rep · 2023
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92/100
Hierarchical classification-based pan-cancer methylation analysis to classify primary cancer.
PMID 38066424 · BMC Bioinformatics · 2023
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83/100
Interpretable prediction models for widespread m6A RNA modification across cell lines and tissues.
PMID 37995291 · Bioinformatics · 2023
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79/100
Unraveling the timeline of gene expression: A pseudotemporal trajectory analysis of single-cell RNA sequencing data.
PMID 37994351 · F1000Res · 2023
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67/100
Exploring microproteins from various model organisms using the mip-mining database.
PMID 37919660 · BMC Genomics · 2023
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85/100
HArmonized single-cell RNA-seq Cell type Assisted Deconvolution (HASCAD).
PMID 37907883 · BMC Med Genomics · 2023
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67/100
Genomic prediction based on selective linkage disequilibrium pruning of low-coverage whole-genome sequence variants in a pure Duroc population.
PMID 37853325 · Genet Sel Evol · 2023
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No data access
Identification and verification of diagnostic biomarkers in recurrent pregnancy loss via machine learning algorithm and WGCNA.⚑
PMID 37691920 · Front Immunol · 2023
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55/100
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Exploring the role and mechanism of Astragalus membranaceus and radix paeoniae rubra in idiopathic pulmonary fibrosis through network pharmacology and experimen⚑
PMID 37666859 · Sci Rep · 2023
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20/100
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Identification of a novel lncRNA prognostic signature and analysis of functional lncRNA AC115619.1 in hepatocellular carcinoma.
PMID 37614318 · Front Pharmacol · 2023
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87/100
spotter: a single-nucleotide resolution stochastic simulation model of supercoiling-mediated transcription and translation in prokaryotes.
PMID 37602419 · Nucleic Acids Res · 2023
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77/100
Systematic Assessment of Small RNA Profiling in Human Extracellular Vesicles.
PMID 37444556 · Cancers (Basel) · 2023
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90/100
UNMF: a unified nonnegative matrix factorization for multi-dimensional omics data.
PMID 37478378 · Brief Bioinform · 2023
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60/100
Cell-type annotation with accurate unseen cell-type identification using multiple references.
PMID 37379341 · PLoS Comput Biol · 2023
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68/100
A global database for modeling tumor-immune cell communication.
PMID 37438390 · Sci Data · 2023
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66/100
Detecting aberrant DNA methylation in Illumina DNA methylation arrays: a toolbox and recommendations for its use.
PMID 37218167 · Epigenetics · 2023
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73/100
TransOrGAN: An Artificial Intelligence Mapping of Rat Transcriptomic Profiles between Organs, Ages, and Sexes.
PMID 37200521 · Chem Res Toxicol · 2023
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84/100
VIGET: A web portal for study of vaccine-induced host responses based on Reactome pathways and ImmPort data.
PMID 37180100 · Front Immunol · 2023
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64/100
On the holobiont 'predictome' of immunocompetence in pigs.⚑
PMID 37127575 · Genet Sel Evol · 2023
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40/100
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