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146 matching publication(s)
Widespread allele-specific topological domains in the human genome are not confined to imprinted gene clusters.
PMID 36869353 · Genome Biol · 2023
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64/100
Whole-genome sequencing of cryopreserved resources from French Large White pigs at two distinct sampling times reveals strong signatures of convergent and diver
PMID 36864379 · Genet Sel Evol · 2023
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100/100
Bulk and single-cell characterisation of the immune heterogeneity of atherosclerosis identifies novel targets for immunotherapy.
PMID 36855107 · BMC Biol · 2023
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70/100
Screening of core genes prognostic for sepsis and construction of a ceRNA regulatory network.
PMID 36855106 · BMC Med Genomics · 2023
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86/100
Shifts from cooperative to individual-based predation defense determine microbial predator-prey dynamics.
PMID 36854789 · ISME J · 2023
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84/100
Emergent dynamics of underlying regulatory network links EMT and androgen receptor-dependent resistance in prostate cancer.
PMID 36851919 · Comput Struct Biotechnol J · 2023
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78/100
Gene Regulatory Interactions at Lamina-Associated Domains.⚑
PMID 36833261 · Genes (Basel) · 2023
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31/100
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Evaluating native-like structures of RNA-protein complexes through the deep learning method.
PMID 36828844 · Nat Commun · 2023
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67/100
Enteroendocrine cell lineages that differentially control feeding and gut motility.
PMID 36810133 · Elife · 2023
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88/100
Social complexity, life-history and lineage influence the molecular basis of castes in vespid wasps.⚑
PMID 36828829 · Nat Commun · 2023
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52/100
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The Planemo toolkit for developing, deploying, and executing scientific data analyses in Galaxy and beyond.
PMID 36828587 · Genome Res · 2023
L1
No computation
GSDME-mediated pyroptosis promotes the progression and associated inflammation of atherosclerosis.
PMID 36807553 · Nat Commun · 2023
85/100
Enabling Single-Cell Drug Response Annotations from Bulk RNA-Seq Using SCAD.
PMID 36762572 · Adv Sci (Weinh) · 2023
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81/100
Utilizing the codon adaptation index to evaluate the susceptibility to HIV-1 and SARS-CoV-2 related coronaviruses in possible target cells in humans.
PMID 36760235 · Front Cell Infect Microbiol · 2023
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71/100
polishCLR: A Nextflow Workflow for Polishing PacBio CLR Genome Assemblies.
PMID 36792366 · Genome Biol Evol · 2023
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71/100
Identification of genes influencing the evolution of Escherichia coli ST372 in dogs and humans.
PMID 36752777 · Microb Genom · 2023
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89/100
Transcriptome-wide analyses of piRNA binding sites suggest distinct mechanisms regulate piRNA binding and silencing in C. elegans.
PMID 36737102 · RNA · 2023
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88/100
Software JimenaE allows efficient dynamic simulations of Boolean networks, centrality and system state analysis.⚑
PMID 36725967 · Sci Rep · 2023
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74/100
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maxATAC: Genome-scale transcription-factor binding prediction from ATAC-seq with deep neural networks.
PMID 36719906 · PLoS Comput Biol · 2023
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98/100
Performance of methods for SARS-CoV-2 variant detection and abundance estimation within mixed population samples.
PMID 36721781 · PeerJ · 2023
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50/100
nf-core/circrna: a portable workflow for the quantification, miRNA target prediction and differential expression analysis of circular RNAs.
PMID 36694127 · BMC Bioinformatics · 2023
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76/100
High-resolution metagenomic reconstruction of the freshwater spring bloom.
PMID 36698172 · Microbiome · 2023
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69/100
Dynamics and regulation of mitotic chromatin accessibility bookmarking at single-cell resolution.
PMID 36696508 · Sci Adv · 2023
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50/100
Hierarchical cell-type identifier accurately distinguishes immune-cell subtypes enabling precise profiling of tissue microenvironment with single-cell RNA-seque
PMID 36681937 · Brief Bioinform · 2023
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94/100
A temporal classifier predicts histopathology state and parses acute-chronic phasing in inflammatory bowel disease patients.
PMID 36694043 · Commun Biol · 2023
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83/100
Artificial intelligence-guided discovery of gastric cancer continuum.
PMID 36692601 · Gastric Cancer · 2023
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71/100
Population Genomic Analyses Suggest a Hybrid Origin, Cryptic Sexuality, and Decay of Genes Regulating Seed Development for the Putatively Strictly Asexual Ki⚑
PMID 36674965 · Int J Mol Sci · 2023
51/100
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Genomic insight into the influence of selection, crossbreeding, and geography on population structure in poultry.
PMID 36670351 · Genet Sel Evol · 2023
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100/100
In vivo induction of activin A-producing alveolar macrophages supports the progression of lung cell carcinoma.
PMID 36650150 · Nat Commun · 2023
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96/100
Critical Role for the Human Cytomegalovirus Major Immediate Early Proteins in Recruitment of RNA Polymerase II and H3K27Ac To an Enhancer-Like Element in Ori
PMID 36645269 · Microbiol Spectr · 2023
93/100
The rates of adult neurogenesis and oligodendrogenesis are linked to cell cycle regulation through p27-dependent gene repression of SOX2.
PMID 36627412 · Cell Mol Life Sci · 2023
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59/100
A network-guided protocol to discover susceptibility genes in genome-wide association studies using stability selection.
PMID 36609152 · STAR Protoc · 2023
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92/100
Transcriptomic Study on the Lungs of Broilers with Ascites Syndrome.
PMID 36611783 · Animals (Basel) · 2023
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71/100
Fast, accurate, and racially unbiased pan-cancer tumor-only variant calling with tabular machine learning.⚑
PMID 36611079 · NPJ Precis Oncol · 2023
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No data access
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Progressive transformation of the HIV-1 reservoir cell profile over two decades of antiviral therapy.
PMID 36596305 · Cell Host Microbe · 2023
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80/100
β-Catenin activity induces an RNA biosynthesis program promoting therapy resistance in T-cell acute lymphoblastic leukemia.⚑
PMID 36597789 · EMBO Mol Med · 2023
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65/100
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TransFlow: a Snakemake workflow for transmission analysis of Mycobacterium tuberculosis whole-genome sequencing data.⚑
PMID 36469333 · Bioinformatics · 2023
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43/100
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MirDIP 5.2: tissue context annotation and novel microRNA curation.
PMID 36453996 · Nucleic Acids Res · 2023
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89/100
Pharokka: a fast scalable bacteriophage annotation tool.
PMID 36453861 · Bioinformatics · 2023
L1
84/100
Genetic Variants in ARHGEF6 Cause Congenital Anomalies of the Kidneys and Urinary Tract in Humans, Mice, and Frogs.
PMID 36414417 · · 2023
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85/100
COXPRESdb v8: an animal gene coexpression database navigating from a global view to detailed investigations.
PMID 36350658 · Nucleic Acids Res · 2023
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84/100
Evolution and codon usage bias of mitochondrial and nuclear genomes in Aspergillus section Flavi.
PMID 36305682 · G3 (Bethesda) · 2023
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85/100
Cutaneous manifestations in Costello syndrome: HRAS p.Gly12Ser affects RIN1-mediated integrin trafficking in immortalized epidermal keratinocytes.
PMID 35981076 · · 2023
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66/100
GAVISUNK: genome assembly validation via inter-SUNK distances in Oxford Nanopore reads.
PMID 36321867 · Bioinformatics · 2023
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67/100
Intra-Host Co-Existing Strains of SARS-CoV-2 Reference Genome Uncovered by Exhaustive Computational Search.
PMID 37243151 · Viruses · 2023
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100/100