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195 matching publication(s)
Diapause vs. reproductive programs: transcriptional phenotypes in a keystone copepod.⚑
PMID 33782539 · Commun Biol · 2021
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Reproducible, portable, and efficient ancient genome reconstruction with nf-core/eager.
PMID 33777521 · PeerJ · 2021
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95/100
Development of double-positive thymocytes at single-cell resolution.
PMID 33771202 · Genome Med · 2021
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86/100
The oncogene AAMDC links PI3K-AKT-mTOR signaling with metabolic reprograming in estrogen receptor-positive breast cancer.
PMID 33772001 · Nat Commun · 2021
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85/100
GAUGE-Annotated Microbial Transcriptomic Data Facilitate Parallel Mining and High-Throughput Reanalysis To Form Data-Driven Hypotheses.
PMID 33758032 · mSystems · 2021
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70/100
Topological signatures in regulatory network enable phenotypic heterogeneity in small cell lung cancer.
PMID 33729159 · Elife · 2021
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94/100
Discovery and functional interrogation of SARS-CoV-2 RNA-host protein interactions.
PMID 33743211 · Cell · 2021
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84/100
Toward a Consensus in the Repertoire of Hemocytes Identified in Drosophila.
PMID 33748138 · Front Cell Dev Biol · 2021
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74/100
WASP: a versatile, web-accessible single cell RNA-Seq processing platform.
PMID 33736596 · BMC Genomics · 2021
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59/100
Estimating and Correcting for Off-Target Cellular Contamination in Brain Cell Type Specific RNA-Seq Data.
PMID 33746712 · Front Mol Neurosci · 2021
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50/100
Gene co-expression network analysis in human spinal cord highlights mechanisms underlying amyotrophic lateral sclerosis susceptibility.
PMID 33707641 · Sci Rep · 2021
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100/100
The SARS-CoV-2 subgenome landscape and its novel regulatory features.
PMID 33713597 · Mol Cell · 2021
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84/100
Circulating mucosal-associated invariant T cells identify patients responding to anti-PD-1 therapy.
PMID 33723257 · Nat Commun · 2021
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70/100
Prime editing in mice reveals the essentiality of a single base in driving tissue-specific gene expression.
PMID 33722289 · Genome Biol · 2021
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66/100
Polyploidy-associated paramutation in Arabidopsis is determined by small RNAs, temperature, and allele structure.
PMID 33690630 · PLoS Genet · 2021
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97/100
TSUNAMI: Translational Bioinformatics Tool Suite for Network Analysis and Mining.
PMID 33705981 · Genomics Proteomics Bioinformatics · 2021
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79/100
Daily temperature cycles promote alternative splicing of RNAs encoding SR45a, a splicing regulator in maize.
PMID 33705553 · Plant Physiol · 2021
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76/100
CRISPRbuilder-TB: "CRISPR-builder for tuberculosis". Exhaustive reconstruction of the CRISPR locus in mycobacterium tuberculosis complex using SRA.
PMID 33667225 · PLoS Comput Biol · 2021
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97/100
Tumor methionine metabolism drives T-cell exhaustion in hepatocellular carcinoma.
PMID 33674593 · Nat Commun · 2021
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78/100
Comprehensive Analysis of Cell Population Dynamics and Related Core Genes During Vitiligo Development.
PMID 33679890 · Front Genet · 2021
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67/100
DeeReCT-APA: Prediction of Alternative Polyadenylation Site Usage Through Deep Learning.
PMID 33662629 · Genomics Proteomics Bioinformatics · 2021
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50/100
A choreography of centrosomal mRNAs reveals a conserved localization mechanism involving active polysome transport.
PMID 33649340 · Nat Commun · 2021
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96/100
In vivo structural characterization of the SARS-CoV-2 RNA genome identifies host proteins vulnerable to repurposed drugs.
PMID 33636127 · Cell · 2021
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95/100
Experimental identification and in silico prediction of bacterivory in green algae.
PMID 33649548 · ISME J · 2021
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93/100
Potentially bioavailable iron produced through benthic cycling in glaciated Arctic fjords of Svalbard.
PMID 33649339 · Nat Commun · 2021
89/100
Epigenome screening highlights that JMJD6 confers an epigenetic vulnerability and mediates sunitinib sensitivity in renal cell carcinoma.
PMID 33634984 · Clin Transl Med · 2021
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85/100
Curation of over 10 000 transcriptomic studies to enable data reuse.
PMID 33599246 · Database (Oxford) · 2021
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80/100
Systematic and computational identification of Androctonus crassicauda long non-coding RNAs.
PMID 33633149 · Sci Rep · 2021
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71/100
Using prototyping to choose a bioinformatics workflow management system.
PMID 33630841 · PLoS Comput Biol · 2021
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No computation
lncEvo: automated identification and conservation study of long noncoding RNAs.
PMID 33563213 · BMC Bioinformatics · 2021
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61/100
Single-Cell Analysis Reveals Characterization of Infiltrating T Cells in Moderately Differentiated Colorectal Cancer.⚑
PMID 33584715 · Front Immunol · 2021
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45/100
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An OMICs-based meta-analysis to support infection state stratification.
PMID 33560295 · Bioinformatics · 2021
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44/100
Manually curated transcriptomics data collection for toxicogenomic assessment of engineered nanomaterials.
PMID 33558569 · Sci Data · 2021
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94/100
IsomiR_Window: a system for analyzing small-RNA-seq data in an integrative and user-friendly manner.
PMID 33522913 · BMC Bioinformatics · 2021
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78/100
Extensive tissue-specific expression variation and novel regulators underlying circadian behavior.
PMID 33514540 · Sci Adv · 2021
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63/100
TFEB deficiency attenuates mitochondrial degradation upon brown adipose tissue whitening at thermoneutrality
PMID 33516944 · Molecular Metabolism 47:101173 · 2021
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No computation
Expression quantitative trait loci in sheep liver and muscle contribute to variations in meat traits.
PMID 33461502 · Genet Sel Evol · 2021
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90/100
Comprehensive analysis of metastatic gastric cancer tumour cells using single-cell RNA-seq.⚑
PMID 33441952 · Sci Rep · 2021
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47/100
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Endogenous Fatty Acid Synthesis Drives Brown Adipose Tissue Involution
PMID 33440156 · · 2021
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No data access
Current status of use of high throughput nucleotide sequencing in rheumatology.
PMID 33408124 · RMD Open · 2021
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83/100
Disome-seq reveals widespread ribosome collisions that promote cotranslational protein folding.
PMID 33402206 · Genome Biol · 2021
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74/100
Interaction between SNAI2 and MYOD enhances oncogenesis and suppresses differentiation in Fusion Negative Rhabdomyosarcoma.
PMID 33420019 · Nat Commun · 2021
50/100
aCLImatise: automated generation of tool definitions for bioinformatics workflows.
PMID 33325479 · Bioinformatics · 2021
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93/100
Prediction of Alzheimer's disease-specific phospholipase c gamma-1 SNV by deep learning-based approach for high-throughput screening.
PMID 33397809 · Proc Natl Acad Sci U S A · 2021
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48/100
Time course profiling of host cell response to herpesvirus infection using nanopore and synthetic long-read transcriptome sequencing.
PMID 34244540 · Sci Rep · 2021
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50/100