Sizun Jiang
Reproducibility track record
1
assessed papers
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mean reproducibility
0
reproduced (C1–C2)
0
flagged
40
total citations
flag rate:
0%
(0/1)
The share of this author’s assessed papers carrying a ⚑ flag. A concentration is a prompt for expert review — never, on its own, a determination about the person.
Authorship role
first author: 0
last author: 0
Topics
Funders
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Frequent co-authors
Rui Guo 1Roberto Chiarle 1Chang Jiang 1Bo Zhao 1Zhonghao Wang 1Carole Gautier‐Courteille 1Taek-Chin Cheong 1Mingxiang Teng 1Luc Paillard 1John G. Doench 1
Institutions
Brigham and Women's Hospital 1Harvard University 1Boston Children's Hospital 1Moffitt Cancer Center 1Sichuan University 1West China Hospital of Sichuan University 1
Geography (author institutions)
US 1CN 1FR 1IT 1
Co-author network
Collaborators, sized by shared output and coloured by their own reproducibility (green = high, red = low). Click a node to open their card. A pattern is a prompt for review, never a determination.
How this author’s assessed papers reproduced — the outcome of reproduction attempts, not a judgement of the person. Coverage is partial and grows over time.
Assessed papers (1)
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CRISPR/Cas9 Screens Reveal Multiple Layers of B cell CD40 Regulation.
2019 L1 No data access
Complete publication record (167)
Request a reproduction →1 assessed by us (0 reproduced) · 166 not yet assessed — every PubMed paper on record, linked below.
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Abstract 6671: Actionable resistance mechanisms in osteosarcoma uncovered by the elucidate spatial biomarker platform ↗Cancer Research · 2026not yet assessed
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Unsupervised Tissue Concepts for Explainable Sarcoma Subtype Prediction from H&E ↗medRxiv · 2026not yet assessed
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Coordinated immune-epithelial dynamics in the nasal epithelium protect against respiratory virus infection ↗bioRxiv (Cold Spring Harbor Laboratory) · 2026 · PMID 42327112not yet assessed
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Spatial proteomics data for "Cytokine-linked remodeling of the immune microenvironment is a hallmark of transformation in follicular lymphoma" ↗Zenodo (CERN European Organization for Nuclear Research) · 2026not yet assessed
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Spatial proteomics data for "Cytokine-linked remodeling of the immune microenvironment is a hallmark of transformation in follicular lymphoma" ↗Zenodo (CERN European Organization for Nuclear Research) · 2026not yet assessed
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Same-Slide Spatial Multiomics Integration with IN-DEPTH Reveals Tumor Virus–Linked Spatial Reorganization of the Tumor Microenvironment ↗Cancer Discovery · 2026 · PMID 41874448not yet assessed
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Spatial transcriptomics identifies immune-stromal niches associated with cancer in adult dermatomyositis ↗Nature Communications · 2026 · PMID 40166232not yet assessed
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Image Data and Extracted Values for PASTA: Versatile Tyramide-oligonucleotide Amplification for Multi-Modal Spatial Biology ↗Zenodo (CERN European Organization for Nuclear Research) · 2026not yet assessed
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The tumor microenvironment’s role in the response to immune checkpoint blockade ↗Nature Cancer · 2025 · PMID 40514448not yet assessed
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A multi-omics spatial framework for host-microbiome dissection within the intestinal tissue microenvironment ↗Nature Communications · 2025 · PMID 39890778not yet assessed
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The new microbiome on the block: challenges and opportunities of using human tumor sequencing data to study microbes ↗Nature Methods · 2025 · PMID 40954302not yet assessed
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Multi-scaled transcriptomics of chronically inflamed nasal epithelium reveals immune-epithelial dynamics and tissue remodeling in nasal polyp formation ↗Immunity · 2025 · PMID 40945518not yet assessed
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CellLENS enables cross-domain information fusion for enhanced cell population delineation in single-cell spatial omics data ↗Nature Immunology · 2025 · PMID 40404817not yet assessed
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Interferon-responsive HEVs drive tumor tertiary lymphoid structure formation and predict immunotherapy response in nasopharyngeal carcinoma ↗Cell Reports Medicine · 2025 · PMID 40543508not yet assessed
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Association of Glucagon‐Like Peptide‐1 Receptor Agonists With Cancer Risk in Older Adults With Type 2 Diabetes ↗Obesity · 2025 · PMID 40841345not yet assessed
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Points to Consider From the ESTP Pathology 2.0 Working Group: Overview on Spatial Omics Technologies Supporting Drug Discovery and Development ↗Toxicologic Pathology · 2025 · PMID 39930627not yet assessed
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Epstein–Barr virus exploits desmocollin 2 as the principal epithelial cell entry receptor ↗Nature Microbiology · 2025 · PMID 41006833not yet assessed
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Antisense to human CD39 dysregulates immune metabolism in inflammatory bowel disease ↗Cellular and Molecular Immunology · 2025 · PMID 40415115not yet assessed
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Inhibition of estrogen receptor alpha stabilizes regulatory T cell function in autoimmune hepatitis ↗JHEP Reports · 2025 · PMID 41551409not yet assessed
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A Foundation Model for Spatial Proteomics ↗arXiv (Cornell University) · 2025not yet assessed
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AI-driven 3D Spatial Transcriptomics ↗arXiv (Cornell University) · 2025not yet assessed
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PASTA: Versatile Tyramine-oligonucleotide Amplification for Multi-modal Spatial Biology ↗bioRxiv (Cold Spring Harbor Laboratory) · 2025not yet assessed
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Comparative single-cell immune responses in peripheral blood and lymph node of immunized SARS-CoV-2 challenged infant rhesus macaques ↗Frontiers in Immunology · 2025 · PMID 41030442not yet assessed
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Meeting Summary for Keystone Symposia on HIV Cure: Antiretroviral Therapy (ART)-Free Control of HIV Infection in Durban, South Africa, 2025 ↗Pathogens and Immunity · 2025 · PMID 41143136not yet assessed
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1277 Spatial analysis of the DLBCL tumor microenvironment via the novel SignalStar® multiplex immunohistochemistry assay ↗Regular and Young Investigator Award Abstracts · 2025not yet assessed
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1129 Embedding-guided patch selection improves early model confidence in multiplex tissue imaging ↗Regular and Young Investigator Award Abstracts · 2025not yet assessed
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Comparative single-cell immune responses in peripheral blood and lymph node of immunized SARS-CoV-2 challenged infant rhesus macaques ↗UNC Libraries · 2025not yet assessed
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Reflections on Advances in Cancer Research in 2025 ↗Cancer Discovery · 2025 · PMID 41327969not yet assessed
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Benchmarking_tissue_preparation_Stage2 ↗Zenodo (CERN European Organization for Nuclear Research) · 2025not yet assessed
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Benchmarking_tissue_preparation_Stage2 ↗Zenodo (CERN European Organization for Nuclear Research) · 2025not yet assessed
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MAPS: pathologist-level cell type annotation from tissue images through machine learning ↗Nature Communications · 2024 · PMID 38167832not yet assessed
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Graph Fourier transform for spatial omics representation and analyses of complex organs ↗Nature Communications · 2024 · PMID 39209833not yet assessed
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A Hitchhiker's guide to high-dimensional tissue imaging with multiplexed ion beam imaging ↗Methods in cell biology · 2024 · PMID 38705600not yet assessed
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mRNA vaccines against SARS-CoV-2 induce divergent antigen-specific T-cell responses in patients with lung cancer ↗Journal for ImmunoTherapy of Cancer · 2024 · PMID 38177076not yet assessed
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PANINI: Combined protein and nucleic acid imaging in tissues ↗Nature reviews. Immunology · 2024 · PMID 38548935not yet assessed
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A spatial cell atlas of neuroblastoma reveals developmental, epigenetic and spatial axis of tumor heterogeneity ↗bioRxiv (Cold Spring Harbor Laboratory) · 2024 · PMID 38260392not yet assessed
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Same-Slide Spatial Multi-Omics Integration Reveals Tumor Virus-Linked Spatial Reorganization of the Tumor Microenvironment ↗bioRxiv (Cold Spring Harbor Laboratory) · 2024 · PMID 39764057not yet assessed
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SARS-CoV-2 Nsp15 antagonizes the cGAS-STING-mediated antiviral innate immune responses ↗bioRxiv (Cold Spring Harbor Laboratory) · 2024 · PMID 39282446not yet assessed
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Graph Fourier transform for spatial omics representation and analyses of complex organs ↗Research Square · 2024 · PMID 38410424not yet assessed
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A Spatial Multi-Modal Dissection of Host-Microbiome Interactions within the Colitis Tissue Microenvironment ↗bioRxiv (Cold Spring Harbor Laboratory) · 2024 · PMID 38496402not yet assessed
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Epstein-Barr Virus Orchestrates Spatial Reorganization and Immunomodulation within the Classic Hodgkin Lymphoma Tumor Microenvironment ↗bioRxiv (Cold Spring Harbor Laboratory) · 2024 · PMID 38496566not yet assessed
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Cross-domain information fusion for enhanced cell population delineation in single-cell spatial-omics data ↗bioRxiv (Cold Spring Harbor Laboratory) · 2024 · PMID 38798592not yet assessed
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Cytokine-Linked Remodeling of the Immune Microenvironment Is a Hallmark of Transformation in Follicular Lymphoma ↗Blood · 2024not yet assessed
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Abstract C043: Spatial proteomic immune profiling of pancreatic ductal adenocarcinoma and the tumor microenvironment ↗Cancer Research · 2024not yet assessed
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Novel method (MAXIM) uses deep learning model to impute missing stains in multiplex images (mIF). ↗Journal of Clinical Oncology · 2024not yet assessed
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Combined nucleic acid and protein quantification in the native tissue microenvironment ↗Elsevier eBooks · 2024not yet assessed
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Contributors ↗Elsevier eBooks · 2024not yet assessed
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Glucose dissociates DDX21 dimers to regulate mRNA splicing and tissue differentiation ↗Cell · 2023 · PMID 36608661not yet assessed
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Robust single-cell matching and multimodal analysis using shared and distinct features ↗Nature Methods · 2023 · PMID 36624212not yet assessed
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Silencing of aryl hydrocarbon receptor repressor restrains Th17 cell immunity in autoimmune hepatitis ↗Journal of Autoimmunity · 2023 · PMID 38142533not yet assessed
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Diffuse large B-cell lymphomas have spatially defined, tumor immune microenvironments revealed by high-parameter imaging ↗Blood Advances · 2023 · PMID 37196647not yet assessed
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Expanded vacuum-stable gels for multiplexed high-resolution spatial histopathology ↗Nature Communications · 2023 · PMID 37419873not yet assessed
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Morphologic and molecular analysis of liver injury after SARS-CoV-2 vaccination reveals distinct characteristics ↗Journal of Hepatology · 2023 · PMID 37290592not yet assessed
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A DNA tumor virus globally reprograms host 3D genome architecture to achieve immortal growth ↗Nature Communications · 2023 · PMID 36949074not yet assessed
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MIBI dataset for Expanded Vacuum-Stable Gels for Multiplexed High Resolution Spatial Histopathology ↗Zenodo (CERN European Organization for Nuclear Research) · 2023not yet assessed
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MAPS: Pathologist-level cell type annotation from tissue images through machine learning ↗bioRxiv (Cold Spring Harbor Laboratory) · 2023 · PMID 37425872not yet assessed
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Deep Learning Model Imputes Missing Stains in Multiplex Images ↗bioRxiv (Cold Spring Harbor Laboratory) · 2023not yet assessed
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Immune-Epithelial Dynamics and Tissue Remodeling in Chronically Inflamed Nasal Epithelium via Multi-scaled Transcriptomics ↗bioRxiv (Cold Spring Harbor Laboratory) · 2023not yet assessed
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Data for MAPS: Pathologist-level Cell Type Annotation from Tissue Images through Machine Learning ↗Zenodo (CERN European Organization for Nuclear Research) · 2023not yet assessed
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Data for MAPS: Pathologist-level Cell Type Annotation from Tissue Images through Machine Learning ↗Zenodo (CERN European Organization for Nuclear Research) · 2023not yet assessed
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MIBI dataset for Expanded Vacuum-Stable Gels for Multiplexed High Resolution Spatial Histopathology ↗Zenodo (CERN European Organization for Nuclear Research) · 2023not yet assessed
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SARS-CoV-2 replication in airway epithelia requires motile cilia and microvillar reprogramming ↗Cell · 2022 · PMID 36580912not yet assessed
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SARS-CoV-2 infection drives an inflammatory response in human adipose tissue through infection of adipocytes and macrophages ↗Science Translational Medicine · 2022 · PMID 36137009not yet assessed
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Combined protein and nucleic acid imaging reveals virus-dependent B cell and macrophage immunosuppression of tissue microenvironments ↗Immunity · 2022 · PMID 35447093not yet assessed
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Integrated plasma proteomic and single-cell immune signaling network signatures demarcate mild, moderate, and severe COVID-19 ↗Cell Reports Medicine · 2022 · PMID 35839768not yet assessed
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Spatial epitope barcoding reveals clonal tumor patch behaviors ↗Cancer Cell · 2022 · PMID 36240778not yet assessed
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A real-time GPU-accelerated parallelized image processor for large-scale multiplexed fluorescence microscopy data ↗Frontiers in Immunology · 2022 · PMID 36211386not yet assessed
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Aldehyde dehydrogenase 3A1 deficiency leads to mitochondrial dysfunction and impacts salivary gland stem cell phenotype ↗PNAS Nexus · 2022 · PMID 35707206not yet assessed
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Combined protein and nucleic acid staining in tissues with PANINI ↗STAR Protocols · 2022 · PMID 36097384not yet assessed
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Integrating transcription-factor abundance with chromatin accessibility in human erythroid lineage commitment ↗Cell Reports Methods · 2022 · PMID 35463156not yet assessed
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SARS-CoV-2 Replication in Airway Epithelia Requires Motile Cilia and Microvillar Reprogramming ↗SSRN Electronic Journal · 2022not yet assessed
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One-Way Matching of Datasets with Low Rank Signals ↗arXiv (Cornell University) · 2022not yet assessed
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Spatial omics representation and functional tissue module inference using graph Fourier transform ↗bioRxiv (Cold Spring Harbor Laboratory) · 2022not yet assessed
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Editorial: Defining the Spatial Organization of Immune Responses to Cancer and Viruses In Situ ↗Frontiers in Immunology · 2022 · PMID 35140726not yet assessed
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Abstract PD6-03: Spatio-molecular dissection of the breast cancer metastatic microenvironment ↗Cancer Research · 2022not yet assessed
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SARS-CoV-2 infects human pancreatic β cells and elicits β cell impairment ↗Cell Metabolism · 2021 · PMID 34081912not yet assessed
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Immune cell topography predicts response to PD-1 blockade in cutaneous T cell lymphoma ↗Nature Communications · 2021 · PMID 34795254not yet assessed
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Highly Multiplexed Phenotyping of Immunoregulatory Proteins in the Tumor Microenvironment by CODEX Tissue Imaging ↗Frontiers in Immunology · 2021 · PMID 34093591not yet assessed
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Inflammatory molecular endotypes of nasal polyps derived from White and Japanese populations ↗Journal of Allergy and Clinical Immunology · 2021 · PMID 34863854not yet assessed
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Subcellular localization of biomolecules and drug distribution by high-definition ion beam imaging ↗Nature Communications · 2021 · PMID 34330905not yet assessed
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Adjacent Cell Marker Lateral Spillover Compensation and Reinforcement for Multiplexed Images ↗Frontiers in Immunology · 2021 · PMID 34295327not yet assessed
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Human influenza virus challenge identifies cellular correlates of protection for oral vaccination ↗Cell Host & Microbe · 2021 · PMID 34784508not yet assessed
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Determinants of SARS-CoV-2 entry and replication in airway mucosal tissue and susceptibility in smokers ↗Cell Reports Medicine · 2021 · PMID 34604819not yet assessed
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Nanoscopic subcellular imaging enabled by ion beam tomography ↗Nature Communications · 2021 · PMID 33542220not yet assessed
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Rhesus Macaque CODEX Multiplexed Immunohistochemistry Panel for Studying Immune Responses During Ebola Infection ↗Frontiers in Immunology · 2021 · PMID 34938283not yet assessed
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Improved instrumental techniques, including isotopic analysis, applicable to the characterization of unusual materials with potential relevance to aerospace forensics ↗Progress in Aerospace Sciences · 2021not yet assessed
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SARS-CoV-2 entry factors are expressed in nasal, ocular, and oral tissues: implications for COVID-19 prophylaxes/therapeutics ↗Journal of Allergy and Clinical Immunology · 2021not yet assessed
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SARS-CoV-2 infects human adipose tissue and elicits an inflammatory response consistent with severe COVID-19 ↗bioRxiv (Cold Spring Harbor Laboratory) · 2021not yet assessed
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Integrated plasma proteomic and single-cell immune signaling network signatures demarcate mild, moderate, and severe COVID-19 ↗bioRxiv (Cold Spring Harbor Laboratory) · 2021 · PMID 33594362not yet assessed
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Spatial epitope barcoding reveals subclonal tumor patch behaviors ↗bioRxiv (Cold Spring Harbor Laboratory) · 2021not yet assessed
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Immune cell topography predicts response to PD-1 blockade in cutaneous T cell lymphoma ↗Research Square · 2021not yet assessed
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Integrating transcription factor abundance with chromatin accessibility in human erythroid lineage commitment ↗bioRxiv (Cold Spring Harbor Laboratory) · 2021not yet assessed
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Virus-Dependent Immune Conditioning of Tissue Microenvironments ↗bioRxiv (Cold Spring Harbor Laboratory) · 2021not yet assessed
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Robust Single-cell Matching and Multi-modal Analysis Using Shared and Distinct Features Reveals Orchestrated Immune Responses ↗bioRxiv (Cold Spring Harbor Laboratory) · 2021not yet assessed
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Virus-Dependent Immune Conditioning of Tissue Microenvironments ↗SSRN Electronic Journal · 2021not yet assessed
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Spatial Epitope Barcoding Reveals Subclonal Tumor Patch Behaviors ↗SSRN Electronic Journal · 2021not yet assessed
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Aldehyde dehydrogenase 3A1 deficiency leads to mitochondrial dysfunction and impacts salivary gland stem cell self-renewal, differentiation and survival ↗bioRxiv (Cold Spring Harbor Laboratory) · 2021not yet assessed
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Multimodal Analysis of Composition and Spatial Architecture in Human Squamous Cell Carcinoma ↗Cell · 2020 · PMID 32579974not yet assessed
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ACE2 localizes to the respiratory cilia and is not increased by ACE inhibitors or ARBs ↗Nature Communications · 2020 · PMID 33116139not yet assessed
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Multimodal Analysis of Composition and Spatial Architecture in Human Squamous Cell Carcinoma ↗Cell · 2020not yet assessed
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Placental Pathology Findings during and after SARS-CoV-2 Infection: Features of Villitis and Malperfusion ↗Pathobiology · 2020 · PMID 32950981not yet assessed
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Landscape of coordinated immune responses to H1N1 challenge in humans ↗Journal of Clinical Investigation · 2020 · PMID 33044226not yet assessed
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Primary effusion lymphoma enhancer connectome links super-enhancers to dependency factors ↗Nature Communications · 2020 · PMID 33298918not yet assessed
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Robust ACE2 protein expression localizes to the motile cilia of the respiratory tract epithelia and is not increased by ACE inhibitors or angiotensin receptor blockers ↗medRxiv · 2020 · PMID 32511516not yet assessed
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Immune cell topography predicts response to PD-1 blockade in cutaneous T cell lymphoma ↗medRxiv · 2020not yet assessed
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RNA Sequencing Analyses of Gene Expression during Epstein-Barr Virus Infection of Primary B Lymphocytes ↗Journal of Virology · 2019 · PMID 31019051not yet assessed
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Epstein-Barr virus subverts mevalonate and fatty acid pathways to promote infected B-cell proliferation and survival ↗PLoS Pathogens · 2019 · PMID 31518366not yet assessed
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SYCP2 Translocation-Mediated Dysregulation and Frameshift Variants Cause Human Male Infertility ↗The American Journal of Human Genetics · 2019 · PMID 31866047not yet assessed
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CRISPR/Cas9 Screens Reveal Multiple Layers of B cell CD40 RegulationCell Reports · 2019 · PMID 31365872L1 No data access
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TAF Family Proteins and MEF2C Are Essential for Epstein-Barr Virus Super-Enhancer Activity ↗Journal of Virology · 2019 · PMID 31167905not yet assessed
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Genome-wide CRISPR-based gene knockout screens reveal cellular factors and pathways essential for nasopharyngeal carcinoma ↗Journal of Biological Chemistry · 2019 · PMID 31073033not yet assessed
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Subcellular localization of drug distribution by super-resolution ion beam imaging ↗bioRxiv (Cold Spring Harbor Laboratory) · 2019not yet assessed
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Ion beam subcellular tomography ↗bioRxiv (Cold Spring Harbor Laboratory) · 2019not yet assessed
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<i>SYCP2</i> translocation-mediated dysregulation and frameshift variants cause human male infertility ↗bioRxiv (Cold Spring Harbor Laboratory) · 2019not yet assessed
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CRISPR/Cas9 Screens Reveal Multiple Layers of B Cell CD40 Regulation ↗SSRN Electronic Journal · 2019not yet assessed
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CRISPR/Cas9‐Mediated Genome Editing in Epstein‐Barr Virus‐Transformed Lymphoblastoid B‐Cell Lines ↗Current Protocols in Molecular Biology · 2018 · PMID 29337376not yet assessed
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Modulating Gene Expression in Epstein‐Barr Virus (EBV)‐Positive B Cell Lines with CRISPRa and CRISPRi ↗Current Protocols in Molecular Biology · 2018 · PMID 29337370not yet assessed
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Epstein-Barr Virus LMP1-Mediated Oncogenicity ↗Journal of Virology · 2017 · PMID 28835489not yet assessed
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CRISPR/Cas9 Screens Reveal Epstein-Barr Virus-Transformed B Cell Host Dependency Factors ↗Cell Host & Microbe · 2017 · PMID 28494239not yet assessed
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The Epstein-Barr Virus Regulome in Lymphoblastoid Cells ↗Cell Host & Microbe · 2017 · PMID 29024646not yet assessed
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Epstein Barr Virus Drives Cancer Through Transcriptional Regulation and Chromatin DynamicsDigital Access to Scholarship at Harvard (DASH) (Harvard University) · 2017not yet assessed
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Epstein-Barr Virus Oncoprotein Super-enhancers Control B Cell Growth ↗Cell Host & Microbe · 2015 · PMID 25639793not yet assessed
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The NF-κB Genomic Landscape in Lymphoblastoid B Cells ↗Cell Reports · 2014 · PMID 25159142not yet assessed
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Epstein–Barr virus nuclear antigen 3A partially coincides with EBNA3C genome-wide and is tethered to DNA through BATF complexes ↗Proceedings of the National Academy of Sciences · 2014 · PMID 25540416not yet assessed
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Epstein–Barr Virus Nuclear Antigen 3C binds to BATF/IRF4 or SPI1/IRF4 composite sites and recruits Sin3A to repress CDKN2A ↗Proceedings of the National Academy of Sciences · 2013 · PMID 24344258not yet assessed
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Epstein–Barr virus nuclear antigen leader protein localizes to promoters and enhancers with cell transcription factors and EBNA2 ↗Proceedings of the National Academy of Sciences · 2013 · PMID 24167291not yet assessed
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A Divalent Ion Is Crucial in the Structure and Dominant-Negative Function of ID Proteins, a Class of Helix-Loop-Helix Transcription Regulators ↗PLoS ONE · 2012 · PMID 23119064not yet assessed
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Regulation and Function of Pilus Island 1 in Group B Streptococcus ↗Journal of Bacteriology · 2012 · PMID 22408160not yet assessed
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Structural analysis and dimerization profile of the SCAN domain of the pluripotency factor Zfp206 ↗Nucleic Acids Research · 2012 · PMID 22735705not yet assessed
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Toxoplasma infection intrauterine vertical transmission characteristics of the immune2008not yet assessed
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Identification and characterization of a novel tyrosine kinase from megakaryocytes. ↗Journal of Biological Chemistry · 1994 · PMID 8288563not yet assessed
Full bibliography from OpenAlex; reproducibility verdicts matched by PMID.
Author attribution follows OpenAlex disambiguation, which is imperfect — a researcher's papers can be split across profiles or mixed with a namesake.
Merged across profiles sharing this ORCID where present. See every “Jiang S” paper on PubMed ↗