Mingxiang Teng
Reproducibility track record
1
assessed papers
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mean reproducibility
0
reproduced (C1–C2)
0
flagged
40
total citations
flag rate:
0%
(0/1)
The share of this author’s assessed papers carrying a ⚑ flag. A concentration is a prompt for expert review — never, on its own, a determination about the person.
Authorship role
first author: 0
last author: 0
Topics
Funders
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Frequent co-authors
Rui Guo 1Roberto Chiarle 1Chang Jiang 1Sizun Jiang 1Bo Zhao 1Zhonghao Wang 1Carole Gautier‐Courteille 1Taek-Chin Cheong 1Luc Paillard 1John G. Doench 1
Institutions
Brigham and Women's Hospital 1Harvard University 1Boston Children's Hospital 1Moffitt Cancer Center 1Sichuan University 1West China Hospital of Sichuan University 1
Geography (author institutions)
US 1CN 1FR 1IT 1
Co-author network
Collaborators, sized by shared output and coloured by their own reproducibility (green = high, red = low). Click a node to open their card. A pattern is a prompt for review, never a determination.
How this author’s assessed papers reproduced — the outcome of reproduction attempts, not a judgement of the person. Coverage is partial and grows over time.
Assessed papers (1)
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CRISPR/Cas9 Screens Reveal Multiple Layers of B cell CD40 Regulation.
2019 L1 No data access
Complete publication record (158)
Request a reproduction →1 assessed by us (0 reproduced) · 157 not yet assessed — every PubMed paper on record, linked below.
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ShinyEvents: harmonizing longitudinal data for real-world survival estimation ↗npj Precision Oncology · 2026 · PMID 41526666not yet assessed
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Evolution of clonal hematopoiesis during cancer treatment and its impact on outcomes ↗Journal of Clinical Investigation · 2026 · PMID 42262879not yet assessed
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Genome-Wide Variations of End Motif in Cell-Free DNA Fragments Distinguish Immunotherapy Responders from Non-Responders in Head and Neck Cancer: A Multi-Institute Prospective Study ↗medRxiv · 2026 · PMID 41959799not yet assessed
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Abstract 4762: KIF11 regulates EWS-FLI1 and EWS-ATF1 target gene expression in Ewing and clear cell sarcomas ↗Cancer Research · 2026not yet assessed
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Abstract 6768: Selective ULK1/2 inhibitors enhance KRAS pathway blockade and uncover stress-adaptive programs ↗Cancer Research · 2026not yet assessed
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Abstract 6009: Mitochondrial glutathione reductase as a redox vulnerability in KEAP1/NRF2-mutant non-small cell lung cancer ↗Cancer Research · 2026not yet assessed
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Genome-wide variation in cell-free DNA end-motif entropy predicts immunotherapy response in head and neck cancer ↗Journal of Clinical Investigation · 2026 · PMID 42154530not yet assessed
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Abundance and balance of circulating leukocyte subsets and colorectal cancer survival ↗British Journal of Cancer · 2026 · PMID 42237020not yet assessed
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Integrated Genomic and Epigenomic Analysis Reveals Epigenetic Plasticity in Disease Progression and Multidrug Resistance in Multiple Myeloma ↗Cancer Research · 2026 · PMID 42233980not yet assessed
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Treatment with the Nox1/4 inhibitor Setanaxib ameliorates cardiac function in mouse models of Duchenne muscular dystrophy ↗Molecular Therapy · 2026 · PMID 42363603not yet assessed
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Epstein–Barr virus exploits desmocollin 2 as the principal epithelial cell entry receptor ↗Nature Microbiology · 2025 · PMID 41006833not yet assessed
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PROTAC-Mediated Degradation of TAF1 Induces Apoptosis in AML Cells and Inhibits Tumor Growth <i>In Vivo</i> ↗Molecular Cancer Therapeutics · 2025 · PMID 40376796not yet assessed
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Ancestry-dependent patterns of somatic mosaicism and clonal hematopoiesis mutations in over 125,000 individuals reveal distinct cancer associations ↗Human Genomics · 2025 · PMID 41331781not yet assessed
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Viral oncogene EBNALP regulates YY1 DNA binding and alters host 3D genome organization ↗EMBO Reports · 2025 · PMID 39747661not yet assessed
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An Autochthonous Model of Lung Cancer Identifies Requirements for Cellular Transformation in the Naked Mole Rat ↗Cancer Discovery · 2025 · PMID 40920097not yet assessed
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Clonal Hematopoiesis Dynamics and Evolutionary Fitness During Cancer Treatment Impact Clinical Outcomes ↗medRxiv · 2025 · PMID 40950448not yet assessed
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Epstein-Barr Virus Encoded lncRNAs Control the Viral Lytic Switch ↗bioRxiv (Cold Spring Harbor Laboratory) · 2025 · PMID 41279497not yet assessed
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Epigenetic Plasticity Drives Carcinogenesis and Multi-Therapy Resistance in Multiple Myeloma ↗Research Square · 2025 · PMID 40321765not yet assessed
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Peripheral blood somatic mosaicism and clonal hematopoiesis across ancestry backgrounds ↗medRxiv · 2025 · PMID 40166537not yet assessed
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Abstract 4042: Mitochondrial electron transport chain inhibition suppresses NRF2 expression in NSCLC ↗Cancer Research · 2025not yet assessed
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Abstract 1408 Mitochondrial Electron Transport Chain Inhibition Suppresses NRF2 Expression in NSCLC ↗Journal of Biological Chemistry · 2025not yet assessed
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ShinyEvents: harmonizing longitudinal data for real world survival estimation ↗Research Square · 2025 · PMID 40799741not yet assessed
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qcCHIP: an R package to identify clonal hematopoiesis variants using cohort-specific data characteristics ↗Bioinformatics · 2025 · PMID 40973027not yet assessed
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Clonal Hematopoiesis in Patients With Human Immunodeficiency Virus and Cancer ↗The Journal of Infectious Diseases · 2024 · PMID 38657098not yet assessed
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An Epigenomic fingerprint of human cancers by landscape interrogation of super enhancers at the constituent level ↗PLoS Computational Biology · 2024 · PMID 38335222not yet assessed
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BatchFLEX: feature-level equalization of X-batch ↗Bioinformatics · 2024 · PMID 39360977not yet assessed
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The DNA loop release factor WAPL suppresses Epstein-Barr virus latent membrane protein expression to maintain the highly restricted latency I program ↗PLoS Pathogens · 2024 · PMID 39241017not yet assessed
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Abstract 647: FDA approved library screen revealed Ewing and clear cell sarcomas have increased sensitivity to filanesib over other cancer types ↗Cancer Research · 2024not yet assessed
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The DNA loop release factor WAPL suppresses Epstein-Barr virus latent membrane protein expression to maintain the highly restricted latency I program ↗bioRxiv (Cold Spring Harbor Laboratory) · 2024 · PMID 38766209not yet assessed
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Inflammatory Transcriptional Signature Can Discriminate <i>De Novo</i> and <i>Secondary AML</i> ↗Blood · 2024not yet assessed
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Abstract 7423: BATCH-FLEX: Feature-level equalization of x-batch in heterogeneous cancer data ↗Cancer Research · 2024not yet assessed
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Abstract A060 Investigating underlying efficacy and mechanism of action of the KIF11 inhibitor filanesib in Ewing and clear cell sarcomas ↗Cancer Research · 2024not yet assessed
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Mitochondrial Electron Transport Chain Inhibition Suppresses NRF2 Expression in NSCLC ↗Free Radical Biology and Medicine · 2024not yet assessed
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A DNA tumor virus globally reprograms host 3D genome architecture to achieve immortal growth ↗Nature Communications · 2023 · PMID 36949074not yet assessed
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Clonal Hematopoiesis as a Molecular Risk Factor for Doxorubicin-Induced Cardiotoxicity: A Proof-of-Concept Study ↗JCO Precision Oncology · 2023 · PMID 37738545not yet assessed
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PATH-SURVEYOR: pathway level survival enquiry for immuno-oncology and drug repurposing ↗BMC Bioinformatics · 2023 · PMID 37380943not yet assessed
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Pilot Study of Donor-Engrafted Clonal Hematopoiesis Evolution and Clinical Outcomes in Allogeneic Hematopoietic Cell Transplantation Recipients Using a National Registry ↗Transplantation and Cellular Therapy · 2023 · PMID 37517612not yet assessed
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Differences in epigenetic age by HIV status among patients with a non-AIDS defining cancer ↗AIDS · 2023 · PMID 37467055not yet assessed
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Statistical Analysis in ChIP-seq-Related Applications ↗Methods in molecular biology · 2023 · PMID 36929078not yet assessed
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DRPPM-PATH-SURVEIOR: Plug-and-Play Survival Analysis of Pathway-level Signatures and Immune Components ↗Research Square · 2023 · PMID 36993526not yet assessed
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An autochthonous model of lung cancer in the Naked Mole-Rat ( <i>Heterocephalus glaber</i> ) ↗bioRxiv (Cold Spring Harbor Laboratory) · 2023not yet assessed
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Additional file 10 of PATH-SURVEYOR: pathway level survival enquiry for immuno-oncology and drug repurposing ↗INDIGO (University of Illinois at Chicago) · 2023not yet assessed
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Additional file 8 of PATH-SURVEYOR: pathway level survival enquiry for immuno-oncology and drug repurposing ↗Figshare · 2023not yet assessed
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Racial and ethnic differences in clonal hematopoiesis, tumor markers, and outcomes of patients with multiple myeloma ↗Blood Advances · 2022 · PMID 35500227not yet assessed
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The Epstein-Barr Virus Enhancer Interaction Landscapes in Virus-Associated Cancer Cell Lines ↗Journal of Virology · 2022 · PMID 36094314not yet assessed
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A CRISPR screen identifies redox vulnerabilities for KEAP1/NRF2 mutant non-small cell lung cancer ↗Redox Biology · 2022 · PMID 35667246not yet assessed
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DRPPM-EASY: A Web-Based Framework for Integrative Analysis of Multi-Omics Cancer Datasets ↗Biology · 2022 · PMID 35205126not yet assessed
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Unique ER PR expression pattern in breast cancers with CHEK2 mutation: a hormone receptor and HER2 analysis based on germline cancer predisposition genes ↗Breast Cancer Research · 2022 · PMID 35135604not yet assessed
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Summarizing internal dynamics boosts differential analysis and functional interpretation of super enhancers ↗Nucleic Acids Research · 2022 · PMID 35234924not yet assessed
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Author Correction: Expanded encyclopaedias of DNA elements in the human and mouse genomes ↗Nature · 2022 · PMID 35474001not yet assessed
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Author Correction: DNA methylation enzymes and PRC1 restrict B-cell Epstein–Barr virus oncoprotein expression ↗Nature Microbiology · 2022 · PMID 35505195not yet assessed
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A CRISPR screen identifies redox vulnerabilities for KEAP1/NRF2 mutant non-small cell lung cancer ↗bioRxiv (Cold Spring Harbor Laboratory) · 2022not yet assessed
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Corrigendum to “A CRISPR screen identifies redox vulnerabilities for KEAP1/NRF2 mutant non-small cell lung cancer” [Redox Biol. 54 (2022) 102358] ↗Redox Biology · 2022 · PMID 35794066not yet assessed
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Author Correction: Perspectives on ENCODE ↗Nature · 2022 · PMID 35474002not yet assessed
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CYB561A3 is the key lysosomal iron reductase required for Burkitt B-cell growth and survival ↗Blood · 2021 · PMID 34232987not yet assessed
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TIMEx: tumor-immune microenvironment deconvolution web-portal for bulk transcriptomics using pan-cancer scRNA-seq signatures ↗Bioinformatics · 2021 · PMID 33901274not yet assessed
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Cancer Detection and Classification by CpG Island Hypermethylation Signatures in Plasma Cell-Free DNA ↗Cancers · 2021 · PMID 34830765not yet assessed
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Characterizing batch effects and binding site-specific variability in ChIP-seq data ↗NAR Genomics and Bioinformatics · 2021 · PMID 34661103not yet assessed
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Summarizing internal dynamics boosts differential analysis and functional interpretation of super enhancers ↗bioRxiv (Cold Spring Harbor Laboratory) · 2021not yet assessed
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Supplementary Material for: Study on the Dynamic Proliferation of JEV in BHK-21 Cells ↗Figshare · 2021not yet assessed
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Expanded encyclopaedias of DNA elements in the human and mouse genomes ↗Nature · 2020 · PMID 32728249not yet assessed
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Perspectives on ENCODE ↗Nature · 2020 · PMID 32728248not yet assessed
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Resistance to targeted therapies as a multifactorial, gradual adaptation to inhibitor specific selective pressures ↗Nature Communications · 2020 · PMID 32409712not yet assessed
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MYC Controls the Epstein-Barr Virus Lytic Switch ↗Molecular Cell · 2020 · PMID 32315601not yet assessed
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DNA methylation enzymes and PRC1 restrict B-cell Epstein–Barr virus oncoprotein expression ↗Nature Microbiology · 2020 · PMID 32424339not yet assessed
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Histone Loaders CAF1 and HIRA Restrict Epstein-Barr Virus B-Cell Lytic Reactivation ↗mBio · 2020 · PMID 33109754not yet assessed
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Primary effusion lymphoma enhancer connectome links super-enhancers to dependency factors ↗Nature Communications · 2020 · PMID 33298918not yet assessed
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Targeting Casein Kinase 1 Delta Sensitizes Pancreatic and Bladder Cancer Cells to Gemcitabine Treatment by Upregulating Deoxycytidine Kinase ↗Molecular Cancer Therapeutics · 2020 · PMID 32430484not yet assessed
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Histone loaders CAF1 and HIRA restrict Epstein-Barr virus B-cell lytic reactivation ↗bioRxiv (Cold Spring Harbor Laboratory) · 2020not yet assessed
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Editorial: System Biology Methods and Tools for Integrating Omics Data ↗Frontiers in Genetics · 2020 · PMID 33281868not yet assessed
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Additional file of Chromatin structure characteristics of pre-miRNA genomic sequences ↗Figshare · 2020not yet assessed
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Additional file 2 of Chromatin structure characteristics of pre-miRNA genomic sequences ↗Figshare · 2020not yet assessed
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A practical guide to methods controlling false discoveries in computational biology ↗Genome biology · 2019 · PMID 31164141not yet assessed
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RNA Sequencing Analyses of Gene Expression during Epstein-Barr Virus Infection of Primary B Lymphocytes ↗Journal of Virology · 2019 · PMID 31019051not yet assessed
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CRISPR/Cas9 Screens Reveal Multiple Layers of B cell CD40 RegulationCell Reports · 2019 · PMID 31365872L1 No data access
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TAF Family Proteins and MEF2C Are Essential for Epstein-Barr Virus Super-Enhancer Activity ↗Journal of Virology · 2019 · PMID 31167905not yet assessed
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Genome-wide CRISPR-based gene knockout screens reveal cellular factors and pathways essential for nasopharyngeal carcinoma ↗Journal of Biological Chemistry · 2019 · PMID 31073033not yet assessed
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Simulating genetically heterozygous genomes in the tumour tissue according to its clonal evolution history ↗International Journal of Computational Biology and Drug Design · 2019not yet assessed
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Simulating genetically heterozygous genomes in the tumour tissue according to its clonal evolution history ↗International Journal of Computational Biology and Drug Design · 2019not yet assessed
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CRISPR/Cas9 Screens Reveal Multiple Layers of B Cell CD40 Regulation ↗SSRN Electronic Journal · 2019not yet assessed
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Modeling and correct the GC bias of tumor and normal WGS data for SCNA based tumor subclonal population inferring ↗BMC Bioinformatics · 2018 · PMID 29671389not yet assessed
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A practical guide to methods controlling false discoveries in computational biology ↗bioRxiv (Cold Spring Harbor Laboratory) · 2018not yet assessed
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Missing data and technical variability in single-cell RNA-sequencing experiments ↗Biostatistics · 2017 · PMID 29121214not yet assessed
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SMARCB1 is required for widespread BAF complex–mediated activation of enhancers and bivalent promoters ↗Nature Genetics · 2017 · PMID 28945250not yet assessed
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WDNfinder: A method for minimum driver node set detection and analysis in directed and weighted biological network ↗Journal of Bioinformatics and Computational Biology · 2017 · PMID 28918707not yet assessed
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Pre-SCNAClonal: Efficient GC bias correction for SCNA based tumor subclonal populations inferring ↗2017not yet assessed
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Accounting for GC-content bias reduces systematic errors and batch effects in ChIP-seq data ↗Genome Research · 2017 · PMID 29025895not yet assessed
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Environmental benzo[a]pyrene is a transgenerational skeletal toxicant – a novel discovery using the medaka bone model2017not yet assessed
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A benchmark for RNA-seq quantification pipelines ↗Genome biology · 2016 · PMID 27107712not yet assessed
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Erratum to: A benchmark for RNA-seq quantification pipelines ↗Genome biology · 2016 · PMID 27215799not yet assessed
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Erratum to: A benchmark for RNA-seq quantification pipelines ↗Genome biology · 2016not yet assessed
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Abstract 2658: Genome-wide mistargeting of oncogenic SWI/SNF(BAF) complexes in SMARCB1(BAF47)-deficient sarcomas ↗Cancer Research · 2016not yet assessed
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DMcompress:細菌ゲノム圧縮のための動的Markovモデル【Powered by NICT】IEEE Conference Proceedings · 2016not yet assessed
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Accounting for GC-content bias reduces systematic errors and batch effects in ChIP-Seq data ↗bioRxiv (Cold Spring Harbor Laboratory) · 2016not yet assessed
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rHAT: fast alignment of noisy long reads with regional hashing ↗Bioinformatics · 2015 · PMID 26568628not yet assessed
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Family genome browser: visualizing genomes with pedigree information ↗Bioinformatics · 2015 · PMID 25788626not yet assessed
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Missing Data and Technical Variability in Single-Cell RNA-Sequencing Experiments ↗bioRxiv (Cold Spring Harbor Laboratory) · 2015not yet assessed
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The personal genome browser: visualizing functions of genetic variants ↗Nucleic Acids Research · 2014 · PMID 24799434not yet assessed
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Identification of regulatory regions of bidirectional genes in cervical cancer ↗BMC Medical Genomics · 2013 · PMID 23369456not yet assessed
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regSNPs: a strategy for prioritizing regulatory single nucleotide substitutions ↗Bioinformatics · 2012 · PMID 22611130not yet assessed
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The Influence of cis-Regulatory Elements on DNA Methylation Fidelity ↗PLoS ONE · 2012 · PMID 22412954not yet assessed
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Empirical Bayes Model Comparisons for Differential Methylation Analysis ↗Comparative and Functional Genomics · 2012 · PMID 22956892not yet assessed
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Alcohol Alters DNA Methylation Patterns and Inhibits Neural Stem Cell Differentiation ↗Alcoholism Clinical and Experimental Research · 2011 · PMID 21223309not yet assessed
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A modulated empirical Bayes model for identifying topological and temporal estrogen receptor α regulatory networks in breast cancer ↗BMC Systems Biology · 2011 · PMID 21554733not yet assessed
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Chromatin structure characteristics of pre-miRNA genomic sequences ↗BMC Genomics · 2011 · PMID 21702984not yet assessed
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Prioritizing single-nucleotide variations that potentially regulate alternative splicing ↗BMC Proceedings · 2011 · PMID 22373210not yet assessed
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Bioinformatics Database Integration Based on Biomedical Ontology ↗International Journal of Advancements in Computing Technology · 2011not yet assessed
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Additional file 82011not yet assessed
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Prioritization of disease microRNAs through a human phenome-microRNAome network ↗BMC Systems Biology · 2010 · PMID 20522252not yet assessed
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Signal Transducers and Activators of Transcription-1 (STAT1) Regulates microRNA Transcription in Interferon γ-Stimulated HeLa Cells ↗PLoS ONE · 2010 · PMID 20668688not yet assessed
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Signal Transducers and Activators of Transcription-1 (STAT1) Regulates microRNA Transcription in Interferon γ-Stimulated HeLa CellsPublisher · 2010not yet assessed
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Enabling Data Analysis on High-Throughput Data in Large Data Depository Using Web-Based Analysis Platform - A Case Study on Integrating QUEST with GenePattern in Epigenetics Research ↗2009 · PMID 21151835not yet assessed
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2009 Ohio Collaborative Conference on Bioinformatics OCCBIO 2009 Table of Contents2009not yet assessed
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miR2Disease: a manually curated database for microRNA deregulation in human disease ↗Nucleic Acids Research · 2008 · PMID 18927107not yet assessed
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miR2Disease: a manually curated database for microRNA deregulation in human diseaseIUScholarWorks (Indiana University) · 2008not yet assessed
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Evidence that the regulation of diphtheria toxin production is directed at the level of transcription ↗Journal of Bacteriology · 1978 · PMID 98519not yet assessed
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Determination of Corynebacterium diphtheriae toxigenicity by a colorimetric tissue culture assay ↗Journal of Clinical Microbiology · 1978 · PMID 415068not yet assessed
Full bibliography from OpenAlex; reproducibility verdicts matched by PMID.
Author attribution follows OpenAlex disambiguation, which is imperfect — a researcher's papers can be split across profiles or mixed with a namesake.
Merged across profiles sharing this ORCID where present. See every “Teng M” paper on PubMed ↗