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79 matching publication(s)

Publication	Journal	Year	Score	Verdict
PDGFRA defines the mesenchymal stem cell Kaposi's sarcoma progenitors by enabling KSHV oncogenesis in an angiogenic environment. PMID 31881074	PLoS Pathog	2019	85	L1 85/100
RADAR: differential analysis of MeRIP-seq data with a random effect model. ⚑ PMID 31870409	Genome Biol	2019	10	L1 10/100 ⚑
Electron Energy Partition across Interplanetary Shocks. I. Methodology and Data Product. PMID 31806920	Astrophys J Suppl Ser	2019	92	L1 92/100
CRISPR/Cas9 Screens Reveal Multiple Layers of B cell CD40 Regulation. PMID 31365872	Cell Rep	2019	—	L1 No data access
pysradb: A Python package to query next-generation sequencing metadata and data from NCBI Sequence Read Archive. PMID 31114675	F1000Res	2019	90	L1 90/100
pwrEWAS: a user-friendly tool for comprehensive power estimation for epigenome wide association studies (EWAS). PMID 31035919	BMC Bioinformatics	2019	88	L1 88/100
Widespread nitrous oxide undersaturation in farm waterbodies creates an unexpected greenhouse gas sink. PMID 31036633	Proc Natl Acad Sci U S A	2019	87	L1 87/100
Integrating herbarium specimen observations into global phenology data systems. PMID 30937223	Appl Plant Sci	2019	60	L1 60/100
RNA structure maps across mammalian cellular compartments. ⚑ PMID 30886404	Nat Struct Mol Biol	2019	45	L1 45/100 ⚑
PI3K inhibitors protect against glucocorticoid-induced skin atrophy. PMID 30737086	EBioMedicine	2019	76	L1 76/100
Trans-ethnic association study of blood pressure determinants in over 750,000 individuals. PMID 30578418	Nat Genet	2018	—	L1 No data access
Yap1 safeguards mouse embryonic stem cells from excessive apoptosis during differentiation. PMID 30561326	Elife	2018	50	L1 50/100
Genomic Description of 'Candidatus Abyssubacteria,' a Novel Subsurface Lineage Within the Candidate Phylum Hydrogenedentes. PMID 30210471	Front Microbiol	2018	91	L1 91/100
miRge 2.0 for comprehensive analysis of microRNA sequencing data. PMID 30153801	BMC Bioinformatics	2018	89	L1 89/100
Metabolite-Centric Reporter Pathway and Tripartite Network Analysis of Arabidopsis Under Cold Stress. PMID 30258841	Front Bioeng Biotechnol	2018	83	L1 83/100
Verrucomicrobia are prevalent in north-temperate freshwater lakes and display class-level preferences between lake habitats. PMID 29590198	PLoS One	2018	99	L1 99/100
Invasive bacterial disease trends and characterization of group B streptococcal isolates among young infants in southern Mozambique, 2001-2015. PMID 29351318	PLoS One	2018	97	L1 97/100
Numb prevents a complete epithelial-mesenchymal transition by modulating Notch signalling. PMID 29187638	J R Soc Interface	2017	49	L1 49/100
Genome-wide prediction of DNase I hypersensitivity using gene expression. PMID 29051481	Nat Commun	2017	79	L1 79/100
Activity of distinct growth factor receptor network components in breast tumors uncovers two biologically relevant subtypes. PMID 28446242	Genome Med	2017	92	L1 92/100
Distributed biotin-streptavidin transcription roadblocks for mapping cotranscriptional RNA folding. PMID 28398514	Nucleic Acids Res	2017	77	L1 77/100
A robust data scaling algorithm to improve classification accuracies in biomedical data. PMID 27612635	BMC Bioinformatics	2016	87	87/100
Exposure to the widely used herbicide atrazine results in deregulation of global tissue-specific RNA transcription in the third generation and is associated wit ⚑ PMID 27655631	Nucleic Acids Res	2016	10	L1 10/100 ⚑
An open RNA-Seq data analysis pipeline tutorial with an example of reprocessing data from a recent Zika virus study. PMID 27583132	F1000Res	2016	74	L1 74/100
CoINcIDE: A framework for discovery of patient subtypes across multiple datasets. PMID 26961683	Genome Med	2016	87	L1 87/100
Phylogenetic analysis of higher-level relationships within Hydroidolina (Cnidaria: Hydrozoa) using mitochondrial genome data and insight into their mitochondria ⚑ PMID 26618080	PeerJ	2015	68	L1 68/100 ⚑
Cell Specific eQTL Analysis without Sorting Cells. PMID 25955312	PLoS Genet	2015	90	L1 90/100
Conservation and losses of non-coding RNAs in avian genomes. PMID 25822729	PLoS One	2015	100	L1 100/100
Ribosome A and P sites revealed by length analysis of ribosome profiling data. PMID 25805170	Nucleic Acids Res	2015	81	L1 81/100