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25 matching publication(s)

Publication	Journal	Year	Score	Verdict
Hyb: a bioinformatics pipeline for the analysis of CLASH (crosslinking, ligation and sequencing of hybrids) data. PMID 24211736	Methods	2013	71	L1 71/100
DNA Methylation Directs Polycomb-Dependent 3D Genome Re-organization in Naive Pluripotency. PMID 31722211	Cell Rep	2019	50	50/100
Identification of a PRDM1-regulated T cell network to regulate atherosclerotic plaque inflammation. PMID 41039608	Genome Med	2025	100	L1 100/100
randPedPCA: rapid approximation of principal components from large pedigrees. PMID 40877802	Genet Sel Evol	2025	84	L1 84/100
High performance imputation of structural and single nucleotide variants using low-coverage whole genome sequencing. PMID 40155798	Genet Sel Evol	2025	85	85/100
SIRE 2.0: a novel method for estimating polygenic host effects underlying infectious disease transmission, and analytical expressions for prediction accuracies. PMID 40169992	Genet Sel Evol	2025	83	L1 83/100
Community assessment of methods to deconvolve cellular composition from bulk gene expression. PMID 39191725	Nat Commun	2024	63	L1 63/100
PHA4GE quality control contextual data tags: standardized annotations for sharing public health sequence datasets with known quality issues to facilitate testin PMID 38860884	Microb Genom	2024	75	L1 75/100
Microglia maintain structural integrity during fetal brain morphogenesis. PMID 38309258	Cell	2024	68	L1 68/100
Genetics of circulating inflammatory proteins identifies drivers of immune-mediated disease risk and therapeutic targets. PMID 37563310	Nat Immunol	2023	93	L1 93/100
Improving the annotation of the cattle genome by annotating transcription start sites in a diverse set of tissues and populations using Cap Analysis Gene Expres PMID 37216666	G3 (Bethesda)	2023	86	L1 86/100
nf-core/isoseq: simple gene and isoform annotation with PacBio Iso-Seq long-read sequencing. PMID 36961337	Bioinformatics	2023	88	L1 88/100
Optimisation of the core subset for the APY approximation of genomic relationships. PMID 36418945	Genet Sel Evol	2022	85	L1 85/100
Assessment of genotyping array performance for genome-wide association studies and imputation in African cattle. PMID 36057548	Genet Sel Evol	2022	90	L1 90/100
High-throughput sequencing SELEX for the determination of DNA-binding protein specificities in vitro. PMID 35776646	STAR Protoc	2022	65	65/100
Mucospheres produced by a mixotrophic protist impact ocean carbon cycling. PMID 35288549	Nat Commun	2022	58	L2 58/100
Reactive astrocytes acquire neuroprotective as well as deleterious signatures in response to Tau and Aß pathology. PMID 35013236	Nat Commun	2022	84	L1 84/100
Candidates for Balancing Selection in Leishmania donovani Complex Parasites. PMID 34865011	Genome Biol Evol	2021	64	L1 64/100
Estimates of recent and historical effective population size in turbot, seabream, seabass and carp selective breeding programmes. PMID 34742227	Genet Sel Evol	2021	53	L1 53/100
Acquisition and loss of CTX-M plasmids in Shigella species associated with MSM transmission in the UK. PMID 34427554	Microb Genom	2021	92	L1 92/100
Using prototyping to choose a bioinformatics workflow management system. PMID 33630841	PLoS Comput Biol	2021	—	L1 No computation
Evolutionary repair: Changes in multiple functional modules allow meiotic cohesin to support mitosis. PMID 32155147	PLoS Biol	2020	90	L1 90/100
Contribution of retrotransposition to developmental disorders. PMID 31604926	Nat Commun	2019	79	L1 79/100
Improved precision of epigenetic clock estimates across tissues and its implication for biological ageing. PMID 31443728	Genome Med	2019	68	L1 68/100
Trans-ethnic association study of blood pressure determinants in over 750,000 individuals. PMID 30578418	Nat Genet	2018	—	L1 No data access