Explore
← New search
574 matching publication(s)
Comparing time series transcriptome data between plants using a network module finding algorithm.
PMID 31164912 · Plant Methods · 2019
L1
59/100
pysradb: A Python package to query next-generation sequencing metadata and data from NCBI Sequence Read Archive.
PMID 31114675 · F1000Res · 2019
L1
90/100
GREIN: An Interactive Web Platform for Re-analyzing GEO RNA-seq Data.
PMID 31110304 · Sci Rep · 2019
L1
73/100
pwrEWAS: a user-friendly tool for comprehensive power estimation for epigenome wide association studies (EWAS).
PMID 31035919 · BMC Bioinformatics · 2019
L1
88/100
Widespread nitrous oxide undersaturation in farm waterbodies creates an unexpected greenhouse gas sink.
PMID 31036633 · Proc Natl Acad Sci U S A · 2019
L1
87/100
Translation affects mRNA stability in a codon-dependent manner in human cells.
PMID 31012849 · Elife · 2019
L1
87/100
PanglaoDB: a web server for exploration of mouse and human single-cell RNA sequencing data.
PMID 30951143 · Database (Oxford) · 2019
L1
80/100
Integrating herbarium specimen observations into global phenology data systems.
PMID 30937223 · Appl Plant Sci · 2019
L1
60/100
PID1 regulates insulin-dependent glucose uptake by controlling intracellular sorting of GLUT4-storage vesicles
PMID 30904610 · · 2019
L1
No computation
RNA structure maps across mammalian cellular compartments.⚑
PMID 30886404 · Nat Struct Mol Biol · 2019
L1
45/100
⚑
PI3K inhibitors protect against glucocorticoid-induced skin atrophy.
PMID 30737086 · EBioMedicine · 2019
L1
76/100
Trans-ethnic association study of blood pressure determinants in over 750,000 individuals.
PMID 30578418 · Nat Genet · 2018
L1
No data access
Insights into the Evolution of the New World Diploid Cottons (Gossypium, Subgenus Houzingenia) Based on Genome Sequencing.
PMID 30476109 · Genome Biol Evol · 2019
L1
87/100
Yap1 safeguards mouse embryonic stem cells from excessive apoptosis during differentiation.
PMID 30561326 · Elife · 2018
L1
50/100
Predicting position along a looping immune response trajectory.
PMID 30296270 · PLoS One · 2018
L1
98/100
Firefly genomes illuminate parallel origins of bioluminescence in beetles.
PMID 30324905 · Elife · 2018
L1
93/100
A methyl-sensitive element induces bidirectional transcription in TATA-less CpG island-associated promoters.
PMID 30332484 · PLoS One · 2018
L1
63/100
Genomic Description of 'Candidatus Abyssubacteria,' a Novel Subsurface Lineage Within the Candidate Phylum Hydrogenedentes.
PMID 30210471 · Front Microbiol · 2018
L1
91/100
miRge 2.0 for comprehensive analysis of microRNA sequencing data.
PMID 30153801 · BMC Bioinformatics · 2018
L1
89/100
Metabolite-Centric Reporter Pathway and Tripartite Network Analysis of Arabidopsis Under Cold Stress.
PMID 30258841 · Front Bioeng Biotechnol · 2018
L1
83/100
Comparative analysis of circular RNAs between soybean cytoplasmic male-sterile line NJCMS1A and its maintainer NJCMS1B by high-throughput sequencing.
PMID 30208848 · BMC Genomics · 2018
50/100
Cancer-predicting transcriptomic and epigenetic signatures revealed for ulcerative colitis in patient-derived epithelial organoids.
PMID 29983891 · Oncotarget · 2018
L1
65/100
Lipolysis Triggers a Systemic Insulin Response Essential for Efficient Energy Replenishment of Activated Brown Adipose Tissue in Mice
PMID 30033199 · · 2018
L1
No computation
Genome-wide screening of potential RNase Y-processed mRNAs in the M49 serotype Streptococcus pyogenes NZ131.⚑
PMID 29900693 · Microbiologyopen · 2018
L1
57/100
⚑
Verrucomicrobia are prevalent in north-temperate freshwater lakes and display class-level preferences between lake habitats.
PMID 29590198 · PLoS One · 2018
L1
99/100
Single-cell transcriptional dynamics of flavivirus infection.
PMID 29451494 · Elife · 2018
L1
90/100
Invasive bacterial disease trends and characterization of group B streptococcal isolates among young infants in southern Mozambique, 2001-2015.
PMID 29351318 · PLoS One · 2018
L1
97/100
Brown adipose tissue thermogenic adaptation requires Nrf1-mediated proteasomal activity
PMID 29400713 · · 2018
L1
88/100
Octopus-toolkit: a workflow to automate mining of public epigenomic and transcriptomic next-generation sequencing data.
PMID 29420797 · Nucleic Acids Res · 2018
L1
68/100
FoxO transcription factors are required for hepatic HDL cholesterol clearance
PMID 29408809 · · 2018
L1
49/100
Numb prevents a complete epithelial-mesenchymal transition by modulating Notch signalling.
PMID 29187638 · J R Soc Interface · 2017
L1
49/100
Genome-wide prediction of DNase I hypersensitivity using gene expression.
PMID 29051481 · Nat Commun · 2017
L1
79/100
Wide-Open: Accelerating public data release by automating detection of overdue datasets.
PMID 28594819 · PLoS Biol · 2017
L1
74/100
Cold-induced conversion of cholesterol to bile acids in mice shapes the gut microbiome and promotes adaptive thermogenesis
PMID 28604703 · · 2017
No data access
Activity of distinct growth factor receptor network components in breast tumors uncovers two biologically relevant subtypes.
PMID 28446242 · Genome Med · 2017
L1
92/100
The cold-induced lipokine 12,13-diHOME promotes fatty acid transport into brown adipose tissue
PMID 28346411 · Nature Medicine · 2017
L1
78/100
Distributed biotin-streptavidin transcription roadblocks for mapping cotranscriptional RNA folding.
PMID 28398514 · Nucleic Acids Res · 2017
L1
77/100
Thermogenic adipocytes promote HDL turnover and reverse cholesterol transport
PMID 28422089 · Nature Communications · 2017
L1
No computation
Determining virus-host interactions and glycerol metabolism profiles in geographically diverse solar salterns with metagenomics.
PMID 28097058 · PeerJ · 2017
L1
95/100
Metavisitor, a Suite of Galaxy Tools for Simple and Rapid Detection and Discovery of Viruses in Deep Sequence Data.
PMID 28045932 · PLoS One · 2017
L1
78/100
Genome of the Asian longhorned beetle (Anoplophora glabripennis), a globally significant invasive species, reveals key functional and evolutionary innovations a
PMID 27832824 · Genome Biol · 2016
L1
84/100
The role of the multidisciplinary health care team in the management of patients with Marfan syndrome.
PMID 27843325 · · 2016
L1
No computation
A robust data scaling algorithm to improve classification accuracies in biomedical data.
PMID 27612635 · BMC Bioinformatics · 2016
87/100
Exposure to the widely used herbicide atrazine results in deregulation of global tissue-specific RNA transcription in the third generation and is associated wit⚑
PMID 27655631 · Nucleic Acids Res · 2016
L1
10/100
⚑
An open RNA-Seq data analysis pipeline tutorial with an example of reprocessing data from a recent Zika virus study.
PMID 27583132 · F1000Res · 2016
L1
74/100
Spatial organization shapes the turnover of a bacterial transcriptome.
PMID 27198188 · Elife · 2016
L1
71/100
Exosomal microRNA miR-92a concentration in serum reflects human brown fat activity
PMID 27117818 · · 2016
L1
97/100
AuPairWise: A Method to Estimate RNA-Seq Replicability through Co-expression.
PMID 27082953 · PLoS Comput Biol · 2016
L1
88/100
Integrative analyses reveal signaling pathways underlying familial breast cancer susceptibility.
PMID 26969729 · Mol Syst Biol · 2016
L1
67/100