Dataset search
A search engine for scientific quality and reusable datasets: find a dataset, see what it is, how widely it is reused across the literature, and — where our agents have reproduced the papers that use it — whether it holds up. Hands-on, evidence-based, never an unbacked claim.
108 datasets
| Accession | Organism | QC | Reuse (literature) | Studies (✓/⚑) |
|---|---|---|---|---|
|
dbGaP
|
— | — | 647 | 1 1✓ |
|
GEO · Gene expression data for pathological stage I-II lung adenoc...
|
Homo sapiens | A | 432 | 4 4✓ |
|
GEO
|
— | insufficient | 402 | 6 3✓ 1⚑ |
|
GEO · A three-dimensional map of the human genome at kilobase reso...
|
Homo sapiens; Mus musculus | A | 226 | 2 2✓ |
|
GEO · Gene expression analysis of human lung cancer and control sa...
|
Homo sapiens | — | 133 | 2 |
|
GEO · A single-cell and spatially resolved atlas of human breast c...
|
Homo sapiens | A | 113 | 4 2✓ |
|
GEO · Single cell RNA sequencing of lung adenocarcinoma
|
Homo sapiens | A | 108 | 2 1✓ |
|
GEO · Metastasis Gene Expression Profile Predicts Recurrence and D...
|
Homo sapiens | — | 102 | 1 1✓ |
|
GEO · Single cell RNA-seq analysis of melanoma
|
Homo sapiens | — | 101 | 4 2✓ |
|
ArrayExpress
|
— | insufficient | 99 | 1 |
|
GEO
|
— | insufficient | 88 | 3 2✓ |
|
GEO · Prognostic gene signature for normal karyotype AML
|
Homo sapiens | — | 87 | 2 1✓ |
|
GEO · A Molecular Taxonomy of Urothelial Carcinoma
|
Homo sapiens | A | 86 | 5 1✓ 1⚑ |
|
GEO · Single cell RNA-seq analysis of head and neck cancer
|
Homo sapiens | — | 80 | 3 1✓ |
|
GEO
|
— | insufficient | 75 | 2 1✓ |
|
GEO · Genome-wide Methylation Profiles Reveal Quantitative Views o...
|
Homo sapiens | — | 74 | 2 |
|
GEO · Mapping of transcription factor binding sites in mouse embry...
|
Mus musculus | — | 73 | 2 1✓ |
|
GEO
|
— | — | 72 | 3 1✓ 1⚑ |
|
GEO · Differential DNA methylation in Rheumatoid arthritis
|
Homo sapiens | — | 71 | 3 1✓ |
|
GEO · Prognostic gene signature for AML
|
Homo sapiens | — | 67 | 2 1✓ |
|
BioProject
|
— | — | 65 | 1 1✓ |
|
GEO · Development and Validation of a Novel Molecular Biomarker Di...
|
Homo sapiens | — | 60 | 2 1✓ |
|
GEO · Single cell RNA sequencing of primary breast cancer.
|
Homo sapiens | A | 58 | 2 1✓ |
|
GEO · Large-scale Multi-omic Analysis of COVID-19 Severity
|
Homo sapiens | B | 50 | 2 1✓ |
|
GEO · Validated Gene Expression Signatures of Idiopathic Pulmonary...
|
Homo sapiens | — | 43 | 1 1⚑ |
|
GEO · Gene expression profiling of chronic lung disease for the Lu...
|
Homo sapiens | — | 42 | 1 1⚑ |
|
GEO · Dissecting the human liver cellular landscape by single cell...
|
Homo sapiens | — | 28 | 1 1⚑ |
|
ArrayExpress
|
— | insufficient | 27 | 1 1✓ |
|
GEO · Characterizing gene expression in lung tissue of COPD subjec...
|
Homo sapiens | — | 25 | 1 1⚑ |
|
GEO · Continuous Aging of the Human DNA Methylome Throughout the H...
|
Homo sapiens | — | 22 | 1 |
|
ArrayExpress
|
— | insufficient | 21 | 1 |
|
GEO · EPIC-Italy at HuGeF
|
Homo sapiens | — | 21 | 1 |
|
GEO · In vivo antiviral host response to SARS-CoV-2 by viral load,...
|
Homo sapiens | A | 20 | 3 2✓ |
|
GEO · Epigenetic Landscapes in Breast Cancer Cells
|
Homo sapiens | — | 20 | 1 1✓ |
|
GEO · Chromatin interaction analysis reveals changes in small chro...
|
Homo sapiens | — | 19 | 1 1✓ |
|
GEO · CHARGE and Kabuki syndromes: Gene-specific DNA methylation s...
|
Homo sapiens | — | 19 | 1 |
|
GEO · Integrative Epigenome-Wide Analysis Shows That DNA Methylati...
|
Homo sapiens | — | 18 | 1 |
|
GEO · Lung tissues in systemic sclerosis have gene expression patt...
|
Homo sapiens | — | 17 | 1 1⚑ |
|
GEO · Timecourse of estradiol (10nM) exposure in MCF7 breast cance...
|
Homo sapiens | — | 15 | 1 1✓ |
|
GEO · Age-related profiling of DNA methylation in CD8+ T cells rev...
|
Homo sapiens | B | 14 | 1 |
|
GEO · A rat RNA-Seq transcriptomic Bodymap across eleven organs an...
|
Rattus norvegicus | — | 13 | 1 1✓ |
|
GEO · Single cell RNA-seq profiling of two bladder cancer specimen
|
Homo sapiens | — | 12 | 1 1✓ |
|
GEO · Human Liver Illumina Inf 450 DNA methylation data
|
Homo sapiens | — | 12 | 1 1✓ |
|
GEO · Epigenetic signature of birth-weight discordance in Danish t...
|
Homo sapiens | — | 12 | 2 1✓ |
|
ArrayExpress
|
— | insufficient | 11 | 1 1✓ |
|
GEO · Identification of grade and origin specific cell populations...
|
Homo sapiens | — | 11 | 2 |
|
GEO · A Human Liver Cell Atlas reveals Heterogeneity and Epithelia...
|
Homo sapiens | — | 11 | 1 1⚑ |
|
GEO · A cellular taxonomy of the bone marrow stroma in homeostasis...
|
Mus musculus | — | 11 | 2 |
|
GEO · Tabula Muris
|
Mus musculus | insufficient | 11 | 3 2✓ |
|
GEO
|
— | — | 11 | 1 |
|
GEO · Rapid and Pervasive Changes in Genome-Wide Enhancer Usage Du...
|
Mus musculus | — | 11 | 1 |
|
GEO · Duke-UNC-Texas-EBI ENCODE expression project
|
Homo sapiens | — | 10 | 1 1✓ |
|
GEO · Genome wide DNA methylation study of Parkinson's disease in...
|
Homo sapiens | — | 9 | 1 |
|
GEO · Exon arrays of ENCODE tier 1, tier 2 and tier 3 cell types
|
Homo sapiens | — | 9 | 1 1✓ |
|
GEO · Bronchial airway gene expression reflects a COPD-associated...
|
Homo sapiens | — | 9 | 1 1⚑ |
|
GEO · Methylome Analysis and Epigenetic Changes Associated with Me...
|
Homo sapiens | — | 9 | 1 |
|
GEO · Absolute quantification of protein production reveals princi...
|
Escherichia coli | B | 9 | 2 2✓ |
|
GEO · Differential Gene Expression between MCF10A and MCF7 cells
|
Homo sapiens | — | 9 | 1 1✓ |
|
GEO · Many obesity-associated SNPs strongly associate with DNA met...
|
Homo sapiens | — | 9 | 1 |
|
GEO · Profiling 20,077 genes in 25 vaccine recipients: U133 Plus 2...
|
Homo sapiens | insufficient | 8 | 2 1✓ |