Dataset search
A search engine for scientific quality and reusable datasets: find a dataset, see what it is, how widely it is reused across the literature, and — where our agents have reproduced the papers that use it — whether it holds up. Hands-on, evidence-based, never an unbacked claim.
342 datasets
| Accession | Organism | QC | Reuse (literature) | Studies (✓/⚑) |
|---|---|---|---|---|
|
GEO · Single-cell RNA-seq reveals AML hierarchies relevant to dise...
|
Homo sapiens | F 19 | 34 | 2 1✓ |
|
GEO · Tumor cell biodiversity drives microenvironmental reprogramm...
|
Homo sapiens | — | 34 | 1 |
|
GEO · A draft map of cis-regulatory sequences in the mouse genome
|
Mus musculus | — | 34 | 1 |
|
PRIDE
|
— | insufficient | 34 | 1 1⚑ |
|
GEO · Expression data for primary localized prostate cancer versus...
|
Homo sapiens | — | 32 | 2 1✓ |
|
GEO · Adult mouse cortical cell taxonomy by single cell transcript...
|
Mus musculus | B 87 | 31 | 1 |
|
GCA
|
— | — | 30 | 1 1✓ |
|
GEO · Endometriosis transcription profiling
|
Homo sapiens | — | 30 | 1 |
|
GEO · Comprehensive genomic analysis identify novel subtypes and t...
|
Homo sapiens | — | 30 | 1 1✓ |
|
GEO · Normal and Renal Cell Carcinoma Kidney Tissue, Human
|
Homo sapiens | — | 30 | 1 1✓ |
|
GEO · Dissecting the single-cell transcriptome network underlying...
|
Homo sapiens | — | 29 | 1 |
|
GEO · Single-Cell Analyses Inform Mechanisms of Myeloid-Targeted t...
|
Homo sapiens | — | 29 | 1 |
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GEO · Dissecting the human liver cellular landscape by single cell...
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Homo sapiens | — | 28 | 1 1⚑ |
|
GEO · Pathways of ovarian cancer development
|
Homo sapiens | — | 28 | 1 1✓ |
|
ArrayExpress
|
— | insufficient | 27 | 1 1✓ |
|
GCA
|
— | — | 26 | 2 2✓ |
|
PRIDE
|
— | insufficient | 26 | 1 1⚑ |
|
GEO · CITE-seq: Large scale simultaneous measuremnt of epitopes an...
|
Homo sapiens | A 100 | 25 | 1 1✓ |
|
GEO · Gene expression signatures in breast cancer distinguish phen...
|
Homo sapiens | A | 25 | 1 1✓ |
|
GEO · Expression profiles of acute myeloid leukemia patient sample...
|
Homo sapiens | — | 25 | 1 |
|
GEO · Characterizing gene expression in lung tissue of COPD subjec...
|
Homo sapiens | — | 25 | 1 1⚑ |
|
GEO · Integrating microarray-based spatial transcriptomics and sin...
|
Homo sapiens | B 87 | 24 | 1 |
|
ArrayExpress
|
— | insufficient | 22 | 1 1✓ |
|
GEO · Expression data from breast cancer tissues and adjacent norm...
|
Homo sapiens | — | 22 | 1 1✓ |
|
GEO · Single-cell analysis reveals new evolutionary complexity in...
|
Homo sapiens | — | 22 | 1 |
|
GEO · Expression of mRNAs and lncRNAs in cancer revealed by microa...
|
Homo sapiens | — | 22 | 1 1✓ |
|
GEO · Continuous Aging of the Human DNA Methylome Throughout the H...
|
Homo sapiens | — | 22 | 1 |
|
ArrayExpress
|
— | insufficient | 21 | 1 |
|
GEO · Shared and distinct transcriptomic cell types across neocort...
|
Mus musculus | insufficient | 21 | 1 |
|
GEO · Reprogramming of Tumor-infiltrating Immune Cells in Early St...
|
Homo sapiens | C 70 | 21 | 1 |
|
GEO · Clonal replacement of tumor-specific T cells following PD-1...
|
Homo sapiens | A 93 | 21 | 1 |
|
GEO · Concurrent Gene Signatures for Han Chinese Breast Cancers [A...
|
Homo sapiens | — | 21 | 1 1✓ |
|
GEO · EPIC-Italy at HuGeF
|
Homo sapiens | — | 21 | 1 |
|
GEO · In vivo antiviral host response to SARS-CoV-2 by viral load,...
|
Homo sapiens | A | 20 | 3 2✓ |
|
GEO · Single cell RNA-seq analysis of oligodendroglioma
|
Homo sapiens | — | 20 | 1 |
|
GEO · Epigenetic Landscapes in Breast Cancer Cells
|
Homo sapiens | — | 20 | 1 1✓ |
|
GEO · Single cell RNA-seq analysis of IDH-mutant astrocytoma
|
Homo sapiens | — | 20 | 1 |
|
GEO · Chromatin interaction analysis reveals changes in small chro...
|
Homo sapiens | — | 19 | 1 1✓ |
|
GEO · CHARGE and Kabuki syndromes: Gene-specific DNA methylation s...
|
Homo sapiens | — | 19 | 1 |
|
GEO · Erythroid-Specific Transcriptional Changes in PBMCs from Pul...
|
Homo sapiens | — | 18 | 1 |
|
GEO · NSD1 Mutations Generate a Genome-Wide DNA Methylation Signat...
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Homo sapiens | — | 18 | 1 1✓ |
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GEO · Integrative Epigenome-Wide Analysis Shows That DNA Methylati...
|
Homo sapiens | — | 18 | 1 |
|
GEO · A developmental landscape of 3D-cultured human pre-gastrulat...
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Homo sapiens | — | 17 | 1 |
|
GEO · Lung tissues in systemic sclerosis have gene expression patt...
|
Homo sapiens | — | 17 | 1 1⚑ |
|
GEO · Multilineage communication regulates human liver bud self-or...
|
Homo sapiens | — | 17 | 1 1✓ |
|
ArrayExpress
|
— | insufficient | 16 | 1 1✓ |
|
GEO · Predicting age from the transcriptome of human dermal fibrob...
|
Homo sapiens | — | 16 | 1 1✓ |
|
GEO · Single-Cell Transcriptome Analysis of Lineage Diversity and...
|
Homo sapiens | A 96 | 15 | 1 |
|
GEO · Timecourse of estradiol (10nM) exposure in MCF7 breast cance...
|
Homo sapiens | — | 15 | 1 1✓ |
|
GEO · A single cell atlas of human glioma
|
Homo sapiens | — | 15 | 1 |
|
GEO · A single-cell atlas of the peripheral immune response to sev...
|
Homo sapiens | — | 15 | 1 1✓ |
|
GEO · Simultaneous control of non-coding RNA on the G2/M phase of...
|
Homo sapiens | — | 14 | 1 1✓ |
|
GEO · Single-Cell Map of Diverse Immune Phenotypes in the Metastat...
|
Homo sapiens | — | 14 | 1 |
|
GEO · Age-related profiling of DNA methylation in CD8+ T cells rev...
|
Homo sapiens | B | 14 | 1 |
|
GEO · An integrated transcriptome and expressed variant analysis o...
|
Homo sapiens | — | 14 | 2 1✓ |
|
GEO · Context specificity of the EMT transcriptional response
|
Homo sapiens | A 100 | 13 | 1 1⚑ |
|
GEO · PD-L1 blockade-induced temporal single cell dynamics in trip...
|
Homo sapiens | — | 13 | 1 |
|
GEO · A rat RNA-Seq transcriptomic Bodymap across eleven organs an...
|
Rattus norvegicus | — | 13 | 1 1✓ |
|
GEO · Single cell RNA-seq profiling of two bladder cancer specimen
|
Homo sapiens | — | 12 | 1 1✓ |
|
GEO · Immunophenotyping of COVID-19 and Influenza Underscores the...
|
Homo sapiens | B | 12 | 1 1✓ |