Dataset search
A search engine for scientific quality and reusable datasets: find a dataset, see what it is, how widely it is reused across the literature, and — where our agents have reproduced the papers that use it — whether it holds up. Hands-on, evidence-based, never an unbacked claim.
1,076 datasets
| Accession | Organism | QC | Reuse (literature) | Studies (✓/⚑) |
|---|---|---|---|---|
|
GEO · Dynamics of enhancer chromatin signatures mark the transitio...
|
Danio rerio | insufficient | 15 | — |
|
GEO · Systematic mapping of cell state trajectories, cell lineage,...
|
Danio rerio | B 83 | 13 | — |
|
GEO · A map of cis-regulatory elements and 3D genome structures in...
|
Danio rerio | — | 9 | — |
|
GEO · Comprehensive identification of long non-coding RNAs express...
|
Danio rerio | — | 8 | — |
|
GEO · Comprehensive identification of long non-coding RNAs express...
|
Danio rerio | insufficient | 7 | — |
|
GEO · Sperm but not oocyte DNA methylome is inherited by zebrafish...
|
Danio rerio | — | 7 | — |
|
GEO · Single-cell reconstruction of developmental trajectories dur...
|
Danio rerio | — | 6 | — |
|
GEO · Identification of small ORFs in vertebrates using ribosome f...
|
Danio rerio | — | 6 | — |
|
GEO · From pioneer to repressor: Bimodal foxd3 activity dynamicall...
|
Danio rerio | — | 5 | — |
|
GEO · Thyroid hormone regulates distinct paths to maturation in pi...
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Danio rerio | insufficient | 5 | — |
|
GEO · Simultaneous single-cell profiling of lineages and cell type...
|
Danio rerio | — | 4 | — |
|
GEO · Genome-wide maps of binding sites of Nanog-like and Mxtx2 in...
|
Danio rerio | — | 4 | — |
|
GEO · Canonical Nucleosome Organization at Promoters Forms During...
|
Danio rerio | — | 4 | — |
|
GEO · Ribosome Profiling over a Zebrafish Developmental Timecourse
|
Danio rerio | — | 4 | — |
|
GEO · Genome-wide maps of histone variant H3.3 occupancy in zebraf...
|
Danio rerio | — | 4 | — |
|
GEO · Spine patterning is guided by segmentation of the notochord...
|
Danio rerio | — | 3 | — |
|
GEO · RNAseq of wild type zebrafish germline (ovary, oocyte, testi...
|
Danio rerio | — | 3 | — |
|
GEO · Developmental regulation of heterochromatin establishment at...
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Danio rerio | — | 3 | — |
|
GEO · Identification and developmental expression of the full comp...
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Danio rerio | insufficient | 3 | — |
|
GEO · Conserved Function of lincRNAs in Vertebrate Embryonic Devel...
|
Danio rerio | — | 3 | — |
|
GEO · Extensive alternative polyadenylation during zebrafish devel...
|
Danio rerio | — | 3 | — |
|
GEO · Overexpression of UHRF1 drives DNA hypomethylation and hepat...
|
Danio rerio | — | 3 | — |
|
GEO · Dissecting hematopoietic and renal cell heterogeneity in adu...
|
Danio rerio | insufficient | 2 | — |
|
GEO · Systemic gain and loss of chromatin architecture throughout...
|
Danio rerio | — | 2 | — |
|
GEO · Simultaneous lineage tracing and cell type identification us...
|
Danio rerio | — | 2 | — |
|
GEO · AP-1 Regulates Chromatin Accessibility to Promote Sarcomere...
|
Danio rerio | — | 2 | — |
|
GEO · Gene expression profile of cells with unfit Wnt morphogen gr...
|
Danio rerio | — | 2 | — |
|
GEO · Activating transcription factor 6 is necessary and sufficien...
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Danio rerio | — | 2 | — |
|
GEO · Abundant DNA 6mA methylation during early embryogenesis of z...
|
Danio rerio | — | 2 | — |
|
GEO · The functions of m6A and Ythdf2 during zebrafish early devel...
|
Danio rerio | — | 2 | — |
|
GEO · Genome-wide maps of histone variant H3.3 occupancy in zebraf...
|
Danio rerio | insufficient | 2 | — |
|
GEO · Zebrafish microglia transcriptome
|
Danio rerio | — | 2 | — |
|
GEO · Dissecting hematopoietic and renal cell heterogeneity in adu...
|
Danio rerio | — | 1 | — |
|
GEO · Dissecting hematopoietic and renal cell heterogeneity in adu...
|
Danio rerio | — | 1 | — |
|
GEO · Dissecting hematopoietic and renal cell heterogeneity in adu...
|
Danio rerio | — | 1 | — |
|
GEO · postnb lineage traced cells at 7 and 60 days post cryoinjury...
|
Danio rerio | insufficient | 1 | — |
|
GEO · Comparison of the expression profiles of kdrl:mCherry-positi...
|
Danio rerio | — | 1 | — |
|
GEO · Comparison of the expression profile of GFP-positive cells f...
|
Danio rerio | — | 1 | — |
|
GEO · High resolution annotation of Zebrafish transcriptome using...
|
Danio rerio | — | 1 | — |
|
GEO · Whole Retina RNAseq after injury and Cyclopamine(C) treatmen...
|
Danio rerio | — | 1 | — |
|
GEO · Systemic gain and loss of chromatin architecture throughout...
|
Danio rerio | — | 1 | — |
|
GEO · Comprehensive identification and spatial mapping of habenula...
|
Danio rerio | insufficient | 1 | — |
|
GEO · Massively parallel reporter assay of 3’UTR sequences identif...
|
Danio rerio | — | 1 | — |
|
GEO · Endocardial Notch Signaling Promotes Cardiomyocyte Prolifera...
|
Danio rerio | — | 1 | — |
|
GEO · Mutations in Bcl9 and Pygo genes cause congenital heart defe...
|
Danio rerio | — | 1 | — |
|
GEO · Effect of starvation on the transcriptomes of the brain and...
|
Danio rerio | — | 1 | — |
|
GEO · RNA seq analysis on zebrafish Notch 3 mutants and adult neur...
|
Danio rerio | — | 1 | — |
|
GEO · Transcriptome profiling of endothelial cells from wild-type,...
|
Danio rerio | — | 1 | — |
|
GEO · Vitamin D globally accelerates growth and regeneration in ze...
|
Danio rerio | — | 1 | — |
|
GEO · Single-cell analysis of tumor progression reveals the functi...
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Danio rerio | insufficient | 1 | — |
|
GEO · Transcriptome analysis of wt1b:eGFP positive macrophages in...
|
Danio rerio | — | 1 | — |
|
GEO · Phenotypic landscape of schizophrenia-associated genes defin...
|
Danio rerio | — | 1 | — |
|
GEO · Yap regulates glucose utilization and sustains nucleotide sy...
|
Danio rerio | — | 1 | — |
|
GEO · Morphogenesis and differentiation of embryonic vascular smoo...
|
Danio rerio | — | 1 | — |
|
GEO · Neuromesodermal Progenitors are a Conserved Source of Spinal...
|
Danio rerio | — | 1 | — |
|
GEO · Retention of paternal epigenetic memory in the developing te...
|
Danio rerio | — | 1 | — |
|
GEO · Fate plasticity and reprogramming in genetically distinct po...
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Danio rerio | — | 1 | — |
|
GEO · Functionally distinct subgroups of Oligodendrocyte precursor...
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Danio rerio | — | 1 | — |
|
GEO · Defining codon-mediated mRNA decay and No-go decay in zebraf...
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Danio rerio | — | 1 | — |
|
GEO · Single-cell analysis uncovers that metabolic reprogramming i...
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Danio rerio | insufficient | 1 | — |