Dataset search
A search engine for scientific quality and reusable datasets: find a dataset, see what it is, how widely it is reused across the literature, and — where our agents have reproduced the papers that use it — whether it holds up. Hands-on, evidence-based, never an unbacked claim.
231 datasets
| Accession | Organism | QC | Reuse (literature) | Studies (✓/⚑) |
|---|---|---|---|---|
|
GEO · Human endometriosis vs normal endometrium study - transcript...
|
Homo sapiens | — | 59 | 1 |
|
GEO · Single cell RNA sequencing of primary breast cancer.
|
Homo sapiens | A | 58 | 2 1✓ |
|
ENA
|
— | — | 56 | 1 1✓ |
|
GEO · UCSD Human Reference Epigenome Mapping Project
|
Homo sapiens | insufficient | 56 | 1 1✓ |
|
GEO · Single-cell RNA-seq of melanoma ecosystems reveals sources o...
|
Homo sapiens | — | 54 | 1 |
|
GEO · A single-cell transcriptome atlas of the human pancreas [CEL...
|
Homo sapiens | — | 52 | 1 1✓ |
|
ENA
|
— | — | 50 | 1 1✓ |
|
GEO · Large-scale Multi-omic Analysis of COVID-19 Severity
|
Homo sapiens | B | 50 | 2 1✓ |
|
GEO · PTC versus paired normal thyroid tissue
|
Homo sapiens | — | 49 | 1 |
|
GEO · Single-Cell RNAseq analysis of diffuse neoplastic infiltrati...
|
Homo sapiens | — | 47 | 1 |
|
ENA
|
— | — | 44 | 1 1✓ |
|
GEO · Expression data from human breast tumors and their paired no...
|
Homo sapiens | — | 43 | 1 1✓ |
|
GEO · Validated Gene Expression Signatures of Idiopathic Pulmonary...
|
Homo sapiens | — | 43 | 1 1⚑ |
|
GEO · Sporadic vs. Post-Chernobyl Papillary vs. Anaplastic Thyroid...
|
Homo sapiens | — | 43 | 1 1⚑ |
|
GEO · The role of micro-RNA genes in papillary thyroid carcinoma
|
Homo sapiens | — | 42 | 1 |
|
GEO · Gene expression profiling of chronic lung disease for the Lu...
|
Homo sapiens | — | 42 | 1 1⚑ |
|
GEO · Identification of differentially expressed transcription fac...
|
Homo sapiens | — | 41 | 1 1✓ |
|
GEO · Acute myeloid leukemia samples of samples =< 60yrs on HG-U13...
|
Homo sapiens | — | 41 | 1 |
|
GEO
|
— | — | 40 | 2 1✓ |
|
GEO · Identifying breast cancer biomarkers
|
Homo sapiens | — | 39 | 1 1✓ |
|
GEO
|
— | — | 39 | 1 1✓ |
|
GEO · Gene array analysis of anaplastic thyroid carcinoma tissue v...
|
Homo sapiens | — | 39 | 2 1⚑ |
|
GCA
|
— | — | 37 | 1 |
|
ArrayExpress
|
— | insufficient | 36 | 1 1⚑ |
|
GEO · Single cell transcriptomics of human and mouse lung cancers...
|
Homo sapiens; Mus musculus | A | 35 | 1 |
|
ENA
|
— | — | 34 | 1 1✓ |
|
ArrayExpress
|
— | insufficient | 34 | 1 |
|
GEO · Single-cell RNA-seq reveals AML hierarchies relevant to dise...
|
Homo sapiens | F 19 | 34 | 2 1✓ |
|
GEO · Tumor cell biodiversity drives microenvironmental reprogramm...
|
Homo sapiens | — | 34 | 1 |
|
GEO · A draft map of cis-regulatory sequences in the mouse genome
|
Mus musculus | — | 34 | 1 |
|
PRIDE
|
— | insufficient | 34 | 1 1⚑ |
|
GEO · Expression data for primary localized prostate cancer versus...
|
Homo sapiens | — | 32 | 2 1✓ |
|
GEO · Adult mouse cortical cell taxonomy by single cell transcript...
|
Mus musculus | B 87 | 31 | 1 |
|
GCA
|
— | — | 30 | 1 1✓ |
|
GEO · Endometriosis transcription profiling
|
Homo sapiens | — | 30 | 1 |
|
GEO · Comprehensive genomic analysis identify novel subtypes and t...
|
Homo sapiens | — | 30 | 1 1✓ |
|
GEO · Normal and Renal Cell Carcinoma Kidney Tissue, Human
|
Homo sapiens | — | 30 | 1 1✓ |
|
GEO · Dissecting the single-cell transcriptome network underlying...
|
Homo sapiens | — | 29 | 1 |
|
GEO · Single-Cell Analyses Inform Mechanisms of Myeloid-Targeted t...
|
Homo sapiens | — | 29 | 1 |
|
GEO
|
— | — | 28 | 2 1✓ 1⚑ |
|
GEO · Dissecting the human liver cellular landscape by single cell...
|
Homo sapiens | — | 28 | 1 1⚑ |
|
GEO · Pathways of ovarian cancer development
|
Homo sapiens | — | 28 | 1 1✓ |
|
ArrayExpress
|
— | insufficient | 27 | 1 1✓ |
|
GCA
|
— | — | 26 | 2 2✓ |
|
GEO
|
— | — | 26 | 3 1⚑ |
|
GEO
|
— | — | 26 | 2 1✓ 1⚑ |
|
PRIDE
|
— | insufficient | 26 | 1 1⚑ |
|
ENA
|
— | — | 25 | 1 1✓ |
|
GEO · CITE-seq: Large scale simultaneous measuremnt of epitopes an...
|
Homo sapiens | A 100 | 25 | 1 1✓ |
|
GEO · Gene expression signatures in breast cancer distinguish phen...
|
Homo sapiens | A | 25 | 1 1✓ |
|
GEO · Expression profiles of acute myeloid leukemia patient sample...
|
Homo sapiens | — | 25 | 1 |
|
GEO · Characterizing gene expression in lung tissue of COPD subjec...
|
Homo sapiens | — | 25 | 1 1⚑ |
|
ENA
|
— | — | 25 | 1 1✓ |
|
GEO · Integrating microarray-based spatial transcriptomics and sin...
|
Homo sapiens | B 87 | 24 | 1 |
|
ArrayExpress
|
— | insufficient | 22 | 1 1✓ |
|
GEO
|
— | — | 22 | 1 1✓ |
|
GEO · Expression data from breast cancer tissues and adjacent norm...
|
Homo sapiens | — | 22 | 1 1✓ |
|
GEO · Single-cell analysis reveals new evolutionary complexity in...
|
Homo sapiens | — | 22 | 1 |
|
GEO · Expression of mRNAs and lncRNAs in cancer revealed by microa...
|
Homo sapiens | — | 22 | 1 1✓ |
|
GEO · Continuous Aging of the Human DNA Methylome Throughout the H...
|
Homo sapiens | — | 22 | 1 |