Dataset search
A search engine for scientific quality and reusable datasets: find a dataset, see what it is, how widely it is reused across the literature, and — where our agents have reproduced the papers that use it — whether it holds up. Hands-on, evidence-based, never an unbacked claim.
230 datasets
| Accession | Organism | QC | Reuse (literature) | Studies (✓/⚑) |
|---|---|---|---|---|
|
GEO · Single-Cell Transcriptomic Analysis of Human Lung Reveals Co...
|
Homo sapiens | — | 25 | 2 1✓ |
|
ENA
|
— | — | 25 | 1 1✓ |
|
GCA
|
— | — | 24 | 1 1✓ |
|
GEO · Molecular Signatures Underlying Selective Regional Vulnerabi...
|
Homo sapiens | — | 24 | 1 1✓ |
|
GEO · Molecular subtypes of metastatic colorectal cancer are predi...
|
Homo sapiens | — | 22 | 1 1✓ |
|
GEO · Concurrent Gene Signatures for Han Chinese Breast Cancers [A...
|
Homo sapiens | — | 21 | 1 1✓ |
|
GEO · Letrozole (Femara) early and late responses to treatment
|
Homo sapiens | — | 20 | 1 1✓ |
|
GEO · Epigenetic Landscapes in Breast Cancer Cells
|
Homo sapiens | — | 20 | 1 1✓ |
|
GEO · Comprehensive single cell RNAseq analysis of the kidney reve...
|
Mus musculus | B 83 | 19 | 1 |
|
GEO · Chromatin interaction analysis reveals changes in small chro...
|
Homo sapiens | — | 19 | 1 1✓ |
|
GEO · Erythroid-Specific Transcriptional Changes in PBMCs from Pul...
|
Homo sapiens | — | 18 | 1 |
|
GEO · NSD1 Mutations Generate a Genome-Wide DNA Methylation Signat...
|
Homo sapiens | — | 18 | 1 1✓ |
|
GEO
|
— | — | 17 | 3 1✓ 1⚑ |
|
GEO · Multilineage communication regulates human liver bud self-or...
|
Homo sapiens | — | 17 | 1 1✓ |
|
BioProject
|
— | A 96 | 17 | 1 |
|
GEO · Timecourse of estradiol (10nM) exposure in MCF7 breast cance...
|
Homo sapiens | — | 15 | 1 1✓ |
|
GEO · Single cell RNA sequencing analysis of fresh resected human...
|
Homo sapiens | — | 15 | 1 |
|
GEO · A single-cell atlas of the peripheral immune response to sev...
|
Homo sapiens | — | 15 | 1 1✓ |
|
GEO · Expression data from human breast cancers pre and post chemo...
|
Homo sapiens | — | 15 | 1 1✓ |
|
GEO · Proliferating SPP1/MERTK-expressing macrophages in idiopathi...
|
Homo sapiens | — | 14 | 1 |
|
GEO · Single cell atlas of the human midbrain reveals cell state s...
|
Homo sapiens | — | 14 | 1 |
|
GEO · An integrated transcriptome and expressed variant analysis o...
|
Homo sapiens | — | 14 | 2 1✓ |
|
GEO · Context specificity of the EMT transcriptional response
|
Homo sapiens | A 100 | 13 | 1 1⚑ |
|
GEO · Single-cell transcriptomic profiling of the aging mouse brai...
|
Mus musculus | — | 12 | 1 |
|
GEO · Immunophenotyping of COVID-19 and Influenza Underscores the...
|
Homo sapiens | B | 12 | 1 1✓ |
|
GEO
|
— | — | 12 | 1 1✓ |
|
GEO · The gene expression signatures of human normal, benign and P...
|
Homo sapiens | — | 12 | 1 1✓ |
|
ArrayExpress
|
— | insufficient | 11 | 1 1✓ |
|
GEO · A cellular taxonomy of the bone marrow stroma in homeostasis...
|
Mus musculus | — | 11 | 2 |
|
GEO · Tabula Muris
|
Mus musculus | insufficient | 11 | 3 2✓ |
|
GEO
|
— | — | 11 | 1 |
|
GEO · Rapid and Pervasive Changes in Genome-Wide Enhancer Usage Du...
|
Mus musculus | — | 11 | 1 |
|
GEO
|
— | — | 10 | 1 1⚑ |
|
GEO · Duke-UNC-Texas-EBI ENCODE expression project
|
Homo sapiens | — | 10 | 1 1✓ |
|
GEO · Single cell RNA_Seq in aging of hematopoietic stem and proge...
|
Mus musculus | — | 10 | 1 1✓ |
|
GEO · Long noncoding RNA, microRNA, and mRNA expression profiles i...
|
Homo sapiens; synthetic construct | — | 9 | 1 1✓ |
|
GEO · Exon arrays of ENCODE tier 1, tier 2 and tier 3 cell types
|
Homo sapiens | — | 9 | 1 1✓ |
|
GEO · Differential Gene Expression between MCF10A and MCF7 cells
|
Homo sapiens | — | 9 | 1 1✓ |
|
GEO · Pervasive polymorphic imprinted methylation in the human pla...
|
Homo sapiens | — | 9 | 1 1✓ |
|
GEO
|
— | — | 9 | 1 |
|
BioProject
|
— | B 87 | 9 | 1 |
|
GCA
|
— | — | 8 | 1 1✓ |
|
GEO · A murine aging cell atlas reveals cell identity and tissue-s...
|
Mus musculus | — | 8 | 1 |
|
GEO · Gene-level analysis of 1231 samples originating from 134 Cau...
|
Homo sapiens | — | 8 | 1 1✓ |
|
ENA
|
— | — | 7 | 1 1✓ |
|
ENA
|
— | — | 7 | 1 1✓ |
|
GEO · Utility and validation in placental DNA methylation profilin...
|
Homo sapiens | — | 7 | 1 1✓ |
|
GEO · Limited systemic sclerosis patients with PAH show biomarkers...
|
Homo sapiens | — | 7 | 1 |
|
GEO · Global hepatic transcript data from fasted male BXD strains...
|
Mus musculus | insufficient | 7 | 1 1✓ |
|
GEO
|
— | — | 7 | 1 1✓ |
|
BioProject
|
— | A 100 | 7 | 2 2✓ |
|
GEO
|
— | — | 6 | 1 1✓ |
|
GEO · Systems biological assessment of immunity to severe and mild...
|
Homo sapiens | C 75 | 6 | 1 1✓ |
|
GEO · Comparison of HNF4 null mouse embryonic livers with control...
|
Mus musculus | — | 6 | 1 1✓ |
|
GEO
|
— | — | 6 | 1 |
|
GEO
|
— | — | 6 | 1 |
|
GEO · DNA methylation anaylsis of placenta samples exposed to vari...
|
Homo sapiens | — | 6 | 1 1✓ |
|
GEO
|
— | — | 6 | 1 1✓ |
|
GEO
|
— | B 82 | 6 | 1 1✓ |
|
GEO · Human brain tissues from healthy controls and multiple scler...
|
Homo sapiens | A 90 | 5 | 1 1✓ |