Dataset search
A search engine for scientific quality and reusable datasets: find a dataset, see what it is, how widely it is reused across the literature, and — where our agents have reproduced the papers that use it — whether it holds up. Hands-on, evidence-based, never an unbacked claim.
271 datasets
| Accession | Organism | QC | Reuse (literature) | Studies (✓/⚑) |
|---|---|---|---|---|
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GEO · Cancer associated SF3B1 hotspot mutations induce cryptic 3'...
|
Homo sapiens; Mus musculus | — | 8 | — |
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GEO · Conserved roles for murine mDUX and human DUX4 in activating...
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Homo sapiens; Mus musculus | B | 8 | 1 |
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GEO · m6A mRNA modifications are deposited in nascent pre-mRNA and...
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Homo sapiens; Mus musculus | — | 8 | — |
|
GEO · Transcriptional and chromatin profiles of duodenum epitheliu...
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Homo sapiens; Mus musculus | insufficient | 7 | — |
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GEO · Single-cell multi-omic integration compares and contrasts fe...
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Homo sapiens; Mus musculus | insufficient | 7 | — |
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GEO · An ultra high-throughput method for single-cell joint analys...
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Homo sapiens; Mus musculus | — | 7 | — |
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GEO · Mapping polycomb complexes in human and mouse embryonic stem...
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Homo sapiens; Mus musculus | — | 7 | — |
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GEO · High throughput joint profiling of chromatin accessibility a...
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Homo sapiens; Mus musculus | — | 7 | — |
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GEO · Full-length mRNA-Seq from single-cell levels of RNA and indi...
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Homo sapiens; Mus musculus | — | 7 | — |
|
GEO · Global Transcriptome Analyses of Mammalian Terminal Erythroi...
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Homo sapiens; Mus musculus | insufficient | 7 | — |
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GEO · Integrative Genomic Analysis Reveals Widespread Enhancer Reg...
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Homo sapiens; Mus musculus | — | 7 | — |
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GEO · Single Cell triple omics sequencing reveals genetic and epig...
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Homo sapiens; Mus musculus | insufficient | 7 | — |
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GEO · Pooled CRISPR screening with single-cell transcriptome read-...
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Homo sapiens; Mus musculus | — | 7 | — |
|
GEO · Single-nucleus analysis of accessible chromatin in developin...
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Homo sapiens; Mus musculus | — | 6 | — |
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GEO · 10x Genomics Drop-seq single-cell RNA-seq of isolated Adult...
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Homo sapiens; Mus musculus | — | 6 | — |
|
GEO · Neutrophils Escort Circulating Tumor Cells to Enable Cell Cy...
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Homo sapiens; Mus musculus | — | 6 | — |
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GEO · Droplet-based combinatorial indexing for massive-scale singl...
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Homo sapiens; Mus musculus | — | 6 | — |
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GEO · In vivo disruption of Rb-E2F-Ezh2 signaling loop causes blad...
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Homo sapiens; Mus musculus | — | 6 | — |
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GEO · Improved Smart-Seq for sensitive full-length transcriptome p...
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Homo sapiens; Mus musculus | A 94 | 6 | — |
|
GEO · Cell type-specific ribosome profiling in vivo.
|
Homo sapiens; Mus musculus | — | 6 | — |
|
GEO · High-resolution mapping reveals a conserved, widespread, dyn...
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Homo sapiens; Mus musculus | — | 6 | — |
|
GEO · mRNA destabilization is the dominant effect of mammalian mic...
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Homo sapiens; Mus musculus | — | 6 | — |
|
GEO · Multiplex Single Cell Profiling of Chromatin Accessibility b...
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Homo sapiens; Mus musculus | — | 6 | — |
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GEO · CHiCAGO: Robust Detection of DNA Looping Interactions in Cap...
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Homo sapiens; Mus musculus | — | 6 | — |
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GEO · High-throughput single cell transcriptome analysis and CRISP...
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Homo sapiens; Mus musculus | — | 5 | — |
|
GEO · Colonic single-cell RNA-seq
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Homo sapiens; Mus musculus | insufficient | 5 | — |
|
GEO · Activation of HOTTIP lncRNA perturbs HSC function leading to...
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Homo sapiens; Mus musculus | — | 5 | — |
|
GEO · High-throughput single-cell ChIP-seq identifies heterogeneit...
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Homo sapiens; Mus musculus | insufficient | 5 | — |
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GEO · Identification of the m6Am Methyltransferase PCIF1 Reveals t...
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Homo sapiens; Mus musculus | — | 5 | — |
|
GEO · Single-cell transcriptome profiling reveals neutrophil heter...
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Homo sapiens; Mus musculus | — | 5 | — |
|
GEO · Massively multiplex chemical transcriptomics at single cell...
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Homo sapiens; Mus musculus | B 84 | 5 | — |
|
GEO · Quantitative tRNA-sequencing uncovers metazoan tissue-specif...
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Homo sapiens; Mus musculus | — | 5 | — |
|
GEO · Deep and accurate detection of m6A RNA modifications in huma...
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Homo sapiens; Mus musculus | — | 5 | — |
|
GEO · A transcriptomic atlas of mouse cerebellar cortex reveals no...
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Homo sapiens; Mus musculus | — | 5 | — |
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GEO · miRNA expression of human cancer and mouse cell lines
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Homo sapiens; Mus musculus | B 83 | 5 | — |
|
GEO · A SNF2 protein targets variable copy number repeats and ther...
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Homo sapiens; Mus musculus | — | 5 | — |
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GEO · Transcriptomes of germinal zones of human and mouse fetal ne...
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Homo sapiens; Mus musculus | — | 5 | — |
|
GEO · In Vivo Endothelial Cell Heterogeneity
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Homo sapiens; Mus musculus | — | 5 | — |
|
GEO · Whole-genome Haplotype Reconstruction using Proximity-ligati...
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Homo sapiens; Mus musculus | — | 5 | — |
|
GEO · DNA methylation dynamics of the human pre-implantation embry...
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Homo sapiens; Mus musculus | — | 5 | — |
|
GEO · Gender-specific post-natal demethylation and establishment o...
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Homo sapiens; Mus musculus | insufficient | 5 | — |
|
GEO · Gene expression profiling of human and murine in vitro muscl...
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Homo sapiens; Mus musculus | insufficient | 5 | — |
|
GEO · Nephron endowment
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Homo sapiens; Mus musculus | — | 5 | — |
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GEO · Gene expression changes during development of sunitinib resi...
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Homo sapiens; Mus musculus | insufficient | 5 | — |
|
GEO · Seq-Well: A portable, low-cost platform for single-cell RNA-...
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Homo sapiens; Mus musculus | — | 5 | — |
|
GEO · Identification and validation of a tumor-infiltrating Treg t...
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Homo sapiens; Mus musculus | — | 4 | — |
|
GEO · Identification of a mesenchymal progenitor cell hierarchy in...
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Homo sapiens; Mus musculus | — | 4 | — |
|
GEO · ALKBH5 regulates anti-PD-1 therapy response by modulating la...
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Homo sapiens; Mus musculus | — | 4 | — |
|
GEO · Single-cell RNA-seq of B cell polustion in breast cancer pat...
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Homo sapiens; Mus musculus | F 33 | 4 | — |
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GEO · Transcriptional basis of mouse and human dendritic cell hete...
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Homo sapiens; Mus musculus | — | 4 | — |
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GEO · Massively parallel and time-resolved RNA sequencing in singl...
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Homo sapiens; Mus musculus | — | 4 | — |
|
GEO · Single-cell RNA-seq analysis of mouse and human prostate
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Homo sapiens; Mus musculus | — | 4 | — |
|
GEO · Genome-wide mapping of G-quadruplex structures with CUT&Tag
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Homo sapiens; Mus musculus | — | 4 | — |
|
GEO · Droplet-based Single-cell Total RNA-seq Reveals Differential...
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Homo sapiens; Mus musculus | — | 4 | — |
|
GEO · Sequential ChIP-bisulfite sequencing enables direct genome-s...
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Homo sapiens; Mus musculus | — | 4 | — |
|
GEO · Epigenetic profiling of hematopoietic stem cells and leukemi...
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Homo sapiens; Mus musculus | — | 4 | — |
|
GEO · Base-resolution analyses of sequence and parent-of-origin de...
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Homo sapiens; Mus musculus | insufficient | 4 | — |
|
GEO · Laser Capture Microdissection-Reduced Representation Bisulfi...
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Homo sapiens; Mus musculus | — | 4 | — |
|
GEO · Bloom syndrome protein modulates protein-coding gene and miR...
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Homo sapiens; Mus musculus | — | 4 | — |
|
GEO · RNA sequencing (RNA-SEQ) of EPAS1 knockdown by siRNA in endo...
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Homo sapiens; Mus musculus | — | 4 | 1 1⚑ |