Dataset search
A search engine for scientific quality and reusable datasets: find a dataset, see what it is, how widely it is reused across the literature, and — where our agents have reproduced the papers that use it — whether it holds up. Hands-on, evidence-based, never an unbacked claim.
291 datasets
| Accession | Organism | QC | Reuse (literature) | Studies (✓/⚑) |
|---|---|---|---|---|
|
GEO · The landscape of pharmacogenomic interactions in human cance...
|
Homo sapiens | — | 31 | 1 1✓ |
|
ENA
|
— | — | 30 | 1 |
|
ENA
|
— | — | 30 | 1 |
|
ENA
|
— | — | 29 | 1 |
|
GEO · Dissecting the human liver cellular landscape by single cell...
|
Homo sapiens | — | 28 | 1 1⚑ |
|
GEO · Multiplexing droplet-based single cell RNA-sequencing using...
|
Homo sapiens | — | 28 | 1 |
|
ArrayExpress
|
— | insufficient | 27 | 1 1✓ |
|
GEO · Colon biopsies from UC patients and healthy controls
|
Homo sapiens | insufficient | 27 | 1 |
|
GEO · RNA sequencing of the left ventricle from non-failing donors...
|
Homo sapiens | — | 27 | 1 1⚑ |
|
GEO
|
— | — | 26 | 3 1⚑ |
|
GEO · Single-Cell Transcriptomic Analysis of Human Lung Reveals Co...
|
Homo sapiens | — | 25 | 2 1✓ |
|
ENA
|
— | — | 24 | 1 |
|
GEO · Biobank of Karolinska Endarterectomy (BiKE)
|
Homo sapiens | — | 24 | 2 1✓ |
|
GEO · Molecular Signatures Underlying Selective Regional Vulnerabi...
|
Homo sapiens | — | 24 | 1 1✓ |
|
GEO · Simple combinations of lineage-determining transcription fac...
|
Mus musculus | insufficient | 23 | 1 1✓ |
|
GEO · Continuous Aging of the Human DNA Methylome Throughout the H...
|
Homo sapiens | — | 22 | 1 |
|
ArrayExpress
|
— | insufficient | 21 | 1 |
|
GEO · EPIC-Italy at HuGeF
|
Homo sapiens | — | 21 | 1 |
|
GEO · A single-cell atlas of the human cortex reveals drivers of t...
|
Homo sapiens | — | 20 | 1 |
|
GEO · In vivo antiviral host response to SARS-CoV-2 by viral load,...
|
Homo sapiens | A | 20 | 3 2✓ |
|
GEO · Epigenetic Landscapes in Breast Cancer Cells
|
Homo sapiens | — | 20 | 1 1✓ |
|
GEO
|
— | — | 19 | 1 1✓ |
|
GEO · Comprehensive single cell RNAseq analysis of the kidney reve...
|
Mus musculus | B 83 | 19 | 1 |
|
GEO · Chromatin interaction analysis reveals changes in small chro...
|
Homo sapiens | — | 19 | 1 1✓ |
|
GEO · CHARGE and Kabuki syndromes: Gene-specific DNA methylation s...
|
Homo sapiens | — | 19 | 1 |
|
GEO · Integrative Epigenome-Wide Analysis Shows That DNA Methylati...
|
Homo sapiens | — | 18 | 1 |
|
BioProject
|
— | A 100 | 18 | 2 1✓ 1⚑ |
|
ENA
|
— | — | 18 | 1 1✓ |
|
ENA
|
— | — | 17 | 1 |
|
GEO
|
— | — | 17 | 1 |
|
GEO
|
— | — | 17 | 3 1✓ 1⚑ |
|
ENA
|
— | — | 16 | 1 1✓ |
|
GEO · ChIP-seq and mRNA-seq experiment to find the direct target g...
|
Mus musculus | insufficient | 16 | 1 1✓ |
|
GEO · Timecourse of estradiol (10nM) exposure in MCF7 breast cance...
|
Homo sapiens | — | 15 | 1 1✓ |
|
GEO · Single cell RNA sequencing analysis of fresh resected human...
|
Homo sapiens | — | 15 | 1 |
|
GEO · Genome-wide Analyses of Transcription Factor GATA3-Mediated...
|
Mus musculus | insufficient | 15 | 1 1✓ |
|
GEO · Proliferating SPP1/MERTK-expressing macrophages in idiopathi...
|
Homo sapiens | — | 14 | 1 |
|
GEO · Age-related profiling of DNA methylation in CD8+ T cells rev...
|
Homo sapiens | B | 14 | 1 |
|
ENA
|
— | — | 14 | 1 |
|
GEO · Context specificity of the EMT transcriptional response
|
Homo sapiens | A 100 | 13 | 1 1⚑ |
|
GEO · Single-nucleus transcriptome analysis reveals dysregulation...
|
Homo sapiens | — | 13 | 1 |
|
GEO · Single-nucleus chromatin accessibility and transcriptomic ch...
|
Homo sapiens | — | 13 | 1 |
|
GEO · A rat RNA-Seq transcriptomic Bodymap across eleven organs an...
|
Rattus norvegicus | — | 13 | 1 1✓ |
|
GEO · Single-cell transcriptomic profiling of the aging mouse brai...
|
Mus musculus | — | 12 | 1 |
|
GEO · Deciphering the cis-regulatory architecture of mammalian pho...
|
Mus musculus | insufficient | 12 | 1 1✓ |
|
GEO · A global network of transcription factors, involving E2A, EB...
|
Mus musculus | insufficient | 12 | 1 1✓ |
|
GEO · Chromatin and Transcriptional Signatures for Nodal Signaling...
|
Homo sapiens | insufficient | 12 | 1 1✓ |
|
GEO · Epigenetic signature of birth-weight discordance in Danish t...
|
Homo sapiens | — | 12 | 2 1✓ |
|
GEO · Revisiting the microRNA expression profiling of human interv...
|
Homo sapiens | — | 12 | 1 1✓ |
|
ArrayExpress
|
— | insufficient | 11 | 1 1✓ |
|
GEO · Single Cell RNA sequencing of Adult Human Breast Epithelial...
|
Homo sapiens | insufficient | 11 | 1 1✓ |
|
GEO · A Human Liver Cell Atlas reveals Heterogeneity and Epithelia...
|
Homo sapiens | — | 11 | 1 1⚑ |
|
GEO · A cellular taxonomy of the bone marrow stroma in homeostasis...
|
Mus musculus | — | 11 | 2 |
|
GEO · Tabula Muris
|
Mus musculus | insufficient | 11 | 3 2✓ |
|
GEO
|
— | — | 11 | 1 |
|
GEO · Genome-wide dynamics of Pol II elongation and its interplay...
|
Mus musculus | — | 11 | 1 1⚑ |
|
GEO · Rapid and Pervasive Changes in Genome-Wide Enhancer Usage Du...
|
Mus musculus | — | 11 | 1 |
|
ENA
|
— | — | 10 | 1 1✓ |
|
GEO · Single-cell analysis of cardiogenesis reveals basis for orga...
|
Mus musculus | — | 10 | 1 1✓ |
|
GEO · Duke-UNC-Texas-EBI ENCODE expression project
|
Homo sapiens | — | 10 | 1 1✓ |