Dataset search
A search engine for scientific quality and reusable datasets: find a dataset, see what it is, how widely it is reused across the literature, and — where our agents have reproduced the papers that use it — whether it holds up. Hands-on, evidence-based, never an unbacked claim.
134 datasets
| Accession | Organism | QC | Reuse (literature) | Studies (✓/⚑) |
|---|---|---|---|---|
|
GEO · Single-cell landscape of bronchoalveolar immune cells in COV...
|
Homo sapiens | — | 37 | — |
|
GEO · Genetic Programs in Human and Mouse Early Embryos Revealed b...
|
Homo sapiens; Mus musculus | — | 31 | — |
|
GEO · Transposition of native chromatin for fast and sensitive epi...
|
Homo sapiens | — | 31 | — |
|
GEO · Single-cell chromatin accessibility data using scATAC-seq
|
Homo sapiens; Mus musculus | — | 26 | — |
|
GEO · A Compendium of Chromatin Contact Maps Reveal Spatially Acti...
|
Homo sapiens; Mus musculus | B | 21 | — |
|
GEO · Characterization of the single-cell (ES and MEF) transcripti...
|
Mus musculus | — | 18 | — |
|
GEO · Comprehensive mapping of long-range interactions reveals fol...
|
Homo sapiens | — | 16 | — |
|
GEO · m6A-dependent regulation of messenger RNA stability
|
Homo sapiens | — | 13 | — |
|
GEO · Simultaneous profiling of 3D genome structure and DNA methyl...
|
Homo sapiens | — | 12 | — |
|
GEO · Mammalian NET-seq reveals genome-wide nascent transcription...
|
Homo sapiens | — | 12 | — |
|
GEO · Human and mouse DRIP-seq and DRIPc-seq
|
Homo sapiens; Mus musculus | — | 11 | — |
|
GEO
|
— | — | 10 | — |
|
GEO · High-resolution mapping of ribosome footprints from Arabidop...
|
Arabidopsis thaliana | — | 7 | — |
|
GEO · Replication initiation sites in cancer cells
|
Homo sapiens | — | 6 | — |
|
GEO · Native Elongating Transcript Sequencing Reveals Human Transc...
|
Homo sapiens | — | 6 | — |
|
GEO
|
— | — | 6 | — |
|
GEO · Regulation of poly(A) tail and translation during the somati...
|
Homo sapiens | — | 6 | — |
|
GEO · RNA-Chromatin Interactome Reveals Enhancer-Promoter Connecti...
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Drosophila melanogaster; Homo sapiens; Mus musculus | — | 6 | — |
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GEO · Activation of HOTTIP lncRNA perturbs HSC function leading to...
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Homo sapiens; Mus musculus | — | 5 | — |
|
GEO · Accurate annotation of human protein-coding small open readi...
|
Homo sapiens | — | 5 | — |
|
GEO · Genome-wide mapping of SARS-CoV-2 RNA structures identifies...
|
Escherichia coli; Chlorocebus sabaeus; Severe acute respiratory syndrome coronavirus 2 | — | 5 | — |
|
GEO
|
— | — | 5 | — |
|
GEO · The viral and cellular microRNA targetome in lymphoblastoid...
|
Homo sapiens | — | 5 | — |
|
GEO · A ribosome profiling study of mRNA cleavage by the endonucle...
|
Escherichia coli | — | 5 | — |
|
GEO · The U6 snRNA m6A methyltransferase METTL16 regulates SAM syn...
|
Homo sapiens | — | 5 | — |
|
GEO
|
— | — | 5 | — |
|
GEO · Genome-scale screens identify JNK/JUN signaling as a barrier...
|
Homo sapiens | — | 4 | — |
|
GEO · Nascent RNA sequencing reveals widespread pausing and diverg...
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Homo sapiens | — | 4 | — |
|
GEO
|
— | — | 4 | — |
|
GEO
|
— | — | 3 | — |
|
GEO
|
— | — | 3 | — |
|
GEO · Cut-and-Run in situ factor profiling maps DNA binding and 3D...
|
Saccharomyces cerevisiae; Homo sapiens | — | 3 | — |
|
GEO
|
— | — | 3 | — |
|
GEO
|
— | — | 3 | — |
|
GEO
|
— | — | 3 | — |
|
GEO · Cdk9 regulates a promoter-proximal checkpoint to modulate RN...
|
Schizosaccharomyces pombe | — | 2 | — |
|
GEO · VIRMA mediates preferential m6A mRNA methylation in 3'UTR an...
|
Homo sapiens | — | 2 | — |
|
GEO · CPD-seq map of UV damage formation in human fibroblasts
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Homo sapiens | — | 2 | — |
|
GEO · Systematic Dissection of Sequence Elements Controlling σ70 P...
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Escherichia coli | — | 2 | — |
|
GEO · Deregulated expression of mammalian lncRNA through loss of S...
|
Homo sapiens | — | 2 | — |
|
GEO · RNA-seq and ribosome profiling of heat shocked wild type and...
|
Mus musculus | — | 2 | — |
|
GEO
|
— | — | 2 | — |
|
GEO · Multi-model preclinical platform predicts clinical response...
|
Mus musculus | — | 2 | — |
|
GEO · Genome-scale identification of SARS-CoV-2 and pan-coronaviru...
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Homo sapiens; synthetic construct | — | 2 | — |
|
GEO
|
— | — | 2 | — |
|
GEO
|
— | — | 2 | — |
|
GEO
|
— | — | 2 | — |
|
GEO
|
— | — | 2 | — |
|
GEO · Nuclear Matrix Factor hnRNP U/SAF-A Exerts a Global Control...
|
Homo sapiens | — | 2 | — |
|
GEO · The Cellular EJC Interactome Reveals Higher-Order mRNP Struc...
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Homo sapiens | — | 2 | — |
|
GEO
|
— | — | 2 | — |
|
GEO · DNA-RNA Immunoprecipitation sequencing (DRIP-seq) of human N...
|
Homo sapiens | — | 2 | — |
|
GEO
|
— | — | 2 | — |
|
GEO
|
— | — | 2 | — |
|
GEO · Fine-scale chromatin interaction maps reveal the cis-regulat...
|
Homo sapiens | — | 2 | — |
|
GEO · Tissue-resident macrophage enhancer landscapes are shaped by...
|
Mus musculus | — | 2 | — |
|
GEO · Long Neural Genes Harbor Recurrent DNA Break Clusters in Neu...
|
Mus musculus | — | 2 | — |
|
GEO
|
— | — | 2 | — |
|
GEO
|
— | — | 2 | — |
|
GEO
|
— | — | 2 | — |