Dataset search

A search engine for scientific quality and reusable datasets: find a dataset, see what it is, how widely it is reused across the literature, and — where our agents have reproduced the papers that use it — whether it holds up. Hands-on, evidence-based, never an unbacked claim.

Publications 1.3k Datasets 54 Experiments 4.7k

54 datasets

Accession	Organism	QC	Reuse (literature)	Studies (✓/⚑)
GM12878 IGSR/1000 Genomes	—	—	2,083	6 3✓ 1⚑
A63880 ENA	—	—	143	1 1✓
GSE91061 GEO · Molecular portraits of tumor mutational and micro-environmen...	Homo sapiens	—	117	3 1✓ 1⚑
C34557 ENA	—	—	116	2 1✓
GSE72056 GEO · Single cell RNA-seq analysis of melanoma	Homo sapiens	—	101	4 2✓
GSE103322 GEO · Single cell RNA-seq analysis of head and neck cancer	Homo sapiens	—	80	3 1✓
GSE11431 GEO · Mapping of transcription factor binding sites in mouse embry...	Mus musculus	—	73	2 1✓
GSE31477 GEO · ENCODE Transcription Factor Binding Sites by ChIP-seq from S...	Homo sapiens	insufficient	48	1 1✓
C10365 ENA	—	—	44	1 1✓
E-MTAB-6814 ArrayExpress	—	insufficient	27	1 1✓
GSE21512 GEO · Simple combinations of lineage-determining transcription fac...	Mus musculus	insufficient	23	1 1✓
GPL20712 GEO	—	—	19	1 1✓
PRJEB23709 BioProject	—	A 100	18	2 1✓ 1⚑
R71007 ENA	—	—	18	1 1✓
GSE35681 GEO · ChIP-seq and mRNA-seq experiment to find the direct target g...	Mus musculus	insufficient	16	1 1✓
GSE20898 GEO · Genome-wide Analyses of Transcription Factor GATA3-Mediated...	Mus musculus	insufficient	15	1 1✓
GSE8479 GEO · Resistance Exercise Reverses Aging in Human Skeletal Muscle	Homo sapiens	—	13	1 1✓
GSE20012 GEO · Deciphering the cis-regulatory architecture of mammalian pho...	Mus musculus	insufficient	12	1 1✓
GSE21978 GEO · A global network of transcription factors, involving E2A, EB...	Mus musculus	insufficient	12	1 1✓
GSE28422 GEO · Effects of resistance exercise and resistance training on th...	Homo sapiens	—	12	1 1✓
GSE29422 GEO · Chromatin and Transcriptional Signatures for Nodal Signaling...	Homo sapiens	insufficient	12	1 1✓
GSE63492 GEO · Revisiting the microRNA expression profiling of human interv...	Homo sapiens	—	12	1 1✓
GSE132042 GEO · Tabula Muris	Mus musculus	insufficient	11	3 2✓
GSE9103 GEO · Skeletal Muscle Transcript Profiles in Trained or Sedentary...	Homo sapiens	—	11	1 1✓
GSE126128 GEO · Single-cell analysis of cardiogenesis reveals basis for orga...	Mus musculus	—	10	1 1✓
GSE59114 GEO · Single cell RNA_Seq in aging of hematopoietic stem and proge...	Mus musculus	—	10	1 1✓
GSE131780 GEO · Single cell analysis of smooth muscle cell phenotypic modula...	Homo sapiens; Mus musculus	—	9	1 1✓
GSE19420 GEO	—	—	9	1 1✓
GSE37350 GEO · Altered Subcellular Localization of Transcription Factor TEA...	Mus musculus	insufficient	9	1 1✓
D86256 ENA	—	—	7	1 1✓
GPL19449 GEO	—	—	7	1 1✓
GSE120862 GEO · Contractile activity-specific transcriptome response to acut...	Homo sapiens	—	7	2 1✓
GSE30206 GEO · DNA binding factors shape the mouse methylome at distal regu...	Mus musculus	—	7	1 1✓
GSE32673 GEO	—	insufficient	6	1 1✓
GSE48068 GEO	—	insufficient	6	1 1✓
A16035 ENA	—	—	4	1 1✓
GSE154826 GEO · CITEseq analysis of non-small-cell lung cancer lesions	Homo sapiens	F 53	3	1 1✓
GSE75077 GEO · Whole genome transcriptomic experiments in mice heart develo...	Mus musculus	—	3	1 1✓
GSE89437 GEO	—	C	3	1 1✓
E-MTAB-1788 ArrayExpress	—	insufficient	2	1 1✓
GSE100428 GEO · Heterogeneous responses of hematopoietic stem cells to infla...	Mus musculus	—	2	1 1✓
GSE104840 GEO · LSD1-mediated enhancer silencing enables endocrine cell deve...	Homo sapiens	insufficient	2	1 1✓
GSE119466 GEO · LaminA/C regulates epigenetic and chromatin architecture cha...	Mus musculus	—	2	1 1✓
GSE27686 GEO · Accumulating mitochondrial DNA mutations drive premature hem...	Mus musculus	—	2	1 1✓
GSE41769 GEO	—	—	2	1 1✓
GSE4332 GEO · Cell intrinsic alterations underlie hematopoietic stem cell...	Mus musculus	—	2	1 1✓
GSE56990 GEO · DamID (LmnB1/Dam) Log2 ratios of C57Bl/6 fibroblasts and RAG...	Mus musculus	—	2	1 1✓
GSE72462 GEO	—	—	2	1 1✓
GSE151551 GEO	—	insufficient	1	1 1✓
GSE181053 GEO · Loss of Cdx2 drives direct trophoblast differentiation into...	Mus musculus	insufficient	1	1 1✓
GSE39553 GEO	—	—	1	1 1✓
GSE46075 GEO	—	—	1	1 1✓
GSE48893 GEO	—	—	1	1 1✓
GSE6503 GEO	—	—	1	1 1✓