Dataset search

A search engine for scientific quality and reusable datasets: find a dataset, see what it is, how widely it is reused across the literature, and — where our agents have reproduced the papers that use it — whether it holds up. Hands-on, evidence-based, never an unbacked claim.

Publications 1.3k Datasets 730 Experiments 4.7k

730 datasets

Accession	Organism	QC	Reuse (literature)	Studies (✓/⚑)
PRJNA490626 BioProject	—	A 96	17	1
E-MTAB-2770 ArrayExpress	—	insufficient	16	1 1✓
GSE102556 GEO · Sex-specific Transcriptional Signatures in Human Depression	Homo sapiens; Mus musculus	—	16	1
GSE113957 GEO · Predicting age from the transcriptome of human dermal fibrob...	Homo sapiens	—	16	1 1✓
GSE35681 GEO · ChIP-seq and mRNA-seq experiment to find the direct target g...	Mus musculus	insufficient	16	1 1✓
GSE47552 GEO	—	—	16	1 1⚑
GSE101571 GEO · Analysis of chromatin landscapes in early human development...	Homo sapiens; Mus musculus	—	15	1
GSE103224 GEO · Single-Cell Transcriptome Analysis of Lineage Diversity and...	Homo sapiens	A 96	15	1
GSE105130 GEO · Comprehensive analysis of Transcriptome Profiles in Hepatoce...	Homo sapiens	A 100	15	1
GSE11352 GEO · Timecourse of estradiol (10nM) exposure in MCF7 breast cance...	Homo sapiens	—	15	1 1✓
GSE130148 GEO · Single cell RNA sequencing analysis of fresh resected human...	Homo sapiens	—	15	1
GSE138794 GEO · A single cell atlas of human glioma	Homo sapiens	—	15	1
GSE150728 GEO · A single-cell atlas of the peripheral immune response to sev...	Homo sapiens	—	15	1 1✓
GSE156063 GEO · Upper airway gene expression differentiates COVID-19 from ot...	Homo sapiens	—	15	1 1✓
GSE18728 GEO · Expression data from human breast cancers pre and post chemo...	Homo sapiens	—	15	1 1✓
GSE20898 GEO · Genome-wide Analyses of Transcription Factor GATA3-Mediated...	Mus musculus	insufficient	15	1 1✓
GSE41637 GEO · Evolutionary dynamics of gene and isoform regulation in mamm...	Gallus gallus; Macaca mulatta; Bos taurus; Mus musculus; Rattus norvegicus	B 88	15	1 1✓
GSE115018 GEO · Simultaneous control of non-coding RNA on the G2/M phase of...	Homo sapiens	—	14	1 1✓
GSE128033 GEO · Proliferating SPP1/MERTK-expressing macrophages in idiopathi...	Homo sapiens	—	14	1
GSE143423 GEO · Single-Cell Map of Diverse Immune Phenotypes in the Metastat...	Homo sapiens	—	14	1
GSE143985 GEO · Clinical significance of gene signature generated from the g...	Homo sapiens	—	14	1
GSE157783 GEO · Single cell atlas of the human midbrain reveals cell state s...	Homo sapiens	—	14	1
GSE59065 GEO · Age-related profiling of DNA methylation in CD8+ T cells rev...	Homo sapiens	B	14	1
GSE63042 GEO · An integrated transcriptome and expressed variant analysis o...	Homo sapiens	—	14	2 1✓
E-MTAB-365 ArrayExpress	—	insufficient	13	1 1⚑
GSE100206 GEO · RNA-seq reveals abundant circRNA, lncRNA and mRNA in blood e...	Homo sapiens	—	13	1 1⚑
GSE147405 GEO · Context specificity of the EMT transcriptional response	Homo sapiens	A 100	13	1 1⚑
GSE157827 GEO · Single-nucleus transcriptome analysis reveals dysregulation...	Homo sapiens	—	13	1
GSE169246 GEO · PD-L1 blockade-induced temporal single cell dynamics in trip...	Homo sapiens	—	13	1
GSE174367 GEO · Single-nucleus chromatin accessibility and transcriptomic ch...	Homo sapiens	—	13	1
GSE20257 GEO · Smoking-induced Disarray of the Apical Junctional Complex Ge...	Homo sapiens	—	13	1 1⚑
GSE36802 GEO · microRNA profiling in paired human prostate cancer and benig...	synthetic construct; Homo sapiens	—	13	1
GSE53960 GEO · A rat RNA-Seq transcriptomic Bodymap across eleven organs an...	Rattus norvegicus	—	13	1 1✓
GSE8479 GEO · Resistance Exercise Reverses Aging in Human Skeletal Muscle	Homo sapiens	—	13	1 1✓
GSE9960 GEO	—	—	13	1
GSE102484 GEO · Expression data from invasive breast cancer patient	Homo sapiens	—	12	1
GSE129788 GEO · Single-cell transcriptomic profiling of the aging mouse brai...	Mus musculus	—	12	1
GSE130001 GEO · Single cell RNA-seq profiling of two bladder cancer specimen	Homo sapiens	—	12	1 1✓
GSE149689 GEO · Immunophenotyping of COVID-19 and Influenza Underscores the...	Homo sapiens	B	12	1 1✓
GSE158055 GEO · Large-scale single-cell analysis reveals critical immune cha...	Homo sapiens	—	12	2 1✓
GSE20012 GEO · Deciphering the cis-regulatory architecture of mammalian pho...	Mus musculus	insufficient	12	1 1✓
GSE21978 GEO · A global network of transcription factors, involving E2A, EB...	Mus musculus	insufficient	12	1 1✓
GSE28422 GEO · Effects of resistance exercise and resistance training on th...	Homo sapiens	—	12	1 1✓
GSE29422 GEO · Chromatin and Transcriptional Signatures for Nodal Signaling...	Homo sapiens	insufficient	12	1 1✓
GSE40012 GEO · Blood transcriptome of human bacterial and influenza A pneum...	Homo sapiens	—	12	1 1✓
GSE61258 GEO · Human Liver Illumina Inf 450 DNA methylation data	Homo sapiens	—	12	1 1✓
GSE61496 GEO · Epigenetic signature of birth-weight discordance in Danish t...	Homo sapiens	—	12	2 1✓
GSE63492 GEO · Revisiting the microRNA expression profiling of human interv...	Homo sapiens	—	12	1 1✓
GSE76124 GEO	—	—	12	1 1✓
GSE91035 GEO · The gene expression signatures of human normal, benign and P...	Homo sapiens	—	12	1 1✓
E-MTAB-264 ArrayExpress	—	insufficient	11	1 1✓
GSE113197 GEO · Single Cell RNA sequencing of Adult Human Breast Epithelial...	Homo sapiens	insufficient	11	1 1✓
GSE118828 GEO · Identification of grade and origin specific cell populations...	Homo sapiens	—	11	2
GSE122401 GEO · Proteogenomic characterization of human early-onset gastric...	Homo sapiens	A 100	11	1
GSE124395 GEO · A Human Liver Cell Atlas reveals Heterogeneity and Epithelia...	Homo sapiens	—	11	1 1⚑
GSE128423 GEO · A cellular taxonomy of the bone marrow stroma in homeostasis...	Mus musculus	—	11	2
GSE132042 GEO · Tabula Muris	Mus musculus	insufficient	11	3 2✓
GSE161731 GEO · Dysregulated transcriptional responses to SARS-CoV-2 in the...	Homo sapiens	A	11	1 1✓
GSE17156 GEO · Gene expression signatures of symptomatic respiratory viral...	Homo sapiens	insufficient	11	1 1✓
GSE4226 GEO	—	—	11	1