Dataset search
A search engine for scientific quality and reusable datasets: find a dataset, see what it is, how widely it is reused across the literature, and — where our agents have reproduced the papers that use it — whether it holds up. Hands-on, evidence-based, never an unbacked claim.
148 datasets
| Accession | Organism | QC | Reuse (literature) | Studies (✓/⚑) |
|---|---|---|---|---|
|
IGSR/1000 Genomes
|
— | — | 2,083 | 6 3✓ 1⚑ |
|
GEO
|
— | — | 2,002 | 17 8✓ 3⚑ |
|
dbGaP
|
— | — | 647 | 1 1✓ |
|
GEO · Gene expression Classification of Colon Cancer defines six m...
|
Homo sapiens | — | 410 | 2 1✓ |
|
GEO
|
— | insufficient | 402 | 6 3✓ 1⚑ |
|
GEO
|
— | — | 398 | 8 3✓ 1⚑ |
|
GEO
|
— | — | 258 | 5 2✓ 1⚑ |
|
GEO · A three-dimensional map of the human genome at kilobase reso...
|
Homo sapiens; Mus musculus | A | 226 | 2 2✓ |
|
GEO · Strong Time Dependence of the 76-Gene Prognostic Signature
|
Homo sapiens | A | 217 | 3 2✓ 1⚑ |
|
GEO
|
— | — | 201 | 5 1⚑ |
|
GEO · Experimentally Derived Metastasis Gene Expression Profile Pr...
|
Homo sapiens; Mus musculus | — | 143 | 3 1✓ 1⚑ |
|
ENA
|
— | — | 116 | 2 1✓ |
|
GEO · Single cell RNA-seq analysis of melanoma
|
Homo sapiens | — | 101 | 4 2✓ |
|
GEO
|
— | insufficient | 88 | 3 2✓ |
|
GEO · Alzheimer's Disease Dataset
|
Homo sapiens | — | 87 | 2 1✓ |
|
GEO
|
— | insufficient | 75 | 2 1✓ |
|
GEO
|
— | — | 72 | 3 1✓ 1⚑ |
|
GEO · Development and Validation of a Novel Molecular Biomarker Di...
|
Homo sapiens | — | 60 | 2 1✓ |
|
GEO · Colorectal cancer susceptibility loci as predictive markers...
|
Homo sapiens | — | 57 | 2 1✓ |
|
GEO · Microarray analyses of laser-captured hippocampus reveal dis...
|
Homo sapiens | A | 51 | 1 1✓ |
|
GEO · Expression data from post mortem Alzheimer's disease brains
|
Homo sapiens | — | 50 | 1 1✓ |
|
dbGaP
|
— | — | 39 | 1 |
|
GEO · Genes and Pathways Underlying Regional and Cell Type Changes...
|
Homo sapiens | — | 33 | 1 1✓ |
|
GEO · A single-cell survey of the small intestinal epithelium
|
Mus musculus | insufficient | 32 | 1 1✓ |
|
GEO · The landscape of pharmacogenomic interactions in human cance...
|
Homo sapiens | — | 31 | 1 1✓ |
|
GEO · RNA sequencing of the left ventricle from non-failing donors...
|
Homo sapiens | — | 27 | 1 1⚑ |
|
GEO
|
— | — | 26 | 3 1⚑ |
|
GEO · Single-Cell Transcriptomic Analysis of Human Lung Reveals Co...
|
Homo sapiens | — | 25 | 2 1✓ |
|
GEO · Molecular Signatures Underlying Selective Regional Vulnerabi...
|
Homo sapiens | — | 24 | 1 1✓ |
|
GEO · Molecular subtypes of metastatic colorectal cancer are predi...
|
Homo sapiens | — | 22 | 1 1✓ |
|
GEO · Epigenetic Landscapes in Breast Cancer Cells
|
Homo sapiens | — | 20 | 1 1✓ |
|
GEO · Comprehensive single cell RNAseq analysis of the kidney reve...
|
Mus musculus | B 83 | 19 | 1 |
|
GEO · Chromatin interaction analysis reveals changes in small chro...
|
Homo sapiens | — | 19 | 1 1✓ |
|
GEO
|
— | — | 17 | 3 1✓ 1⚑ |
|
GEO · Timecourse of estradiol (10nM) exposure in MCF7 breast cance...
|
Homo sapiens | — | 15 | 1 1✓ |
|
GEO · Single cell RNA sequencing analysis of fresh resected human...
|
Homo sapiens | — | 15 | 1 |
|
GEO · Proliferating SPP1/MERTK-expressing macrophages in idiopathi...
|
Homo sapiens | — | 14 | 1 |
|
GEO · Context specificity of the EMT transcriptional response
|
Homo sapiens | A 100 | 13 | 1 1⚑ |
|
GEO · Single-cell transcriptomic profiling of the aging mouse brai...
|
Mus musculus | — | 12 | 1 |
|
ArrayExpress
|
— | insufficient | 11 | 1 1✓ |
|
GEO · A cellular taxonomy of the bone marrow stroma in homeostasis...
|
Mus musculus | — | 11 | 2 |
|
GEO · Tabula Muris
|
Mus musculus | insufficient | 11 | 3 2✓ |
|
GEO
|
— | — | 11 | 1 |
|
GEO · Rapid and Pervasive Changes in Genome-Wide Enhancer Usage Du...
|
Mus musculus | — | 11 | 1 |
|
GEO · Duke-UNC-Texas-EBI ENCODE expression project
|
Homo sapiens | — | 10 | 1 1✓ |
|
GEO · Exon arrays of ENCODE tier 1, tier 2 and tier 3 cell types
|
Homo sapiens | — | 9 | 1 1✓ |
|
GEO · Differential Gene Expression between MCF10A and MCF7 cells
|
Homo sapiens | — | 9 | 1 1✓ |
|
GEO · Pervasive polymorphic imprinted methylation in the human pla...
|
Homo sapiens | — | 9 | 1 1✓ |
|
GEO
|
— | — | 9 | 1 |
|
GEO · A murine aging cell atlas reveals cell identity and tissue-s...
|
Mus musculus | — | 8 | 1 |
|
GEO · Gene-level analysis of 1231 samples originating from 134 Cau...
|
Homo sapiens | — | 8 | 1 1✓ |
|
ENA
|
— | — | 7 | 1 1✓ |
|
GEO · Utility and validation in placental DNA methylation profilin...
|
Homo sapiens | — | 7 | 1 1✓ |
|
GEO · Global hepatic transcript data from fasted male BXD strains...
|
Mus musculus | insufficient | 7 | 1 1✓ |
|
BioProject
|
— | A 100 | 7 | 2 2✓ |
|
GEO
|
— | — | 6 | 1 1✓ |
|
GEO
|
— | — | 6 | 1 |
|
GEO · DNA methylation anaylsis of placenta samples exposed to vari...
|
Homo sapiens | — | 6 | 1 1✓ |
|
GEO
|
— | B 82 | 6 | 1 1✓ |
|
GEO · Human brain tissues from healthy controls and multiple scler...
|
Homo sapiens | A 90 | 5 | 1 1✓ |