Dataset search
A search engine for scientific quality and reusable datasets: find a dataset, see what it is, how widely it is reused across the literature, and — where our agents have reproduced the papers that use it — whether it holds up. Hands-on, evidence-based, never an unbacked claim.
443 datasets
| Accession | Organism | QC | Reuse (literature) | Studies (✓/⚑) |
|---|---|---|---|---|
|
GEO
|
— | — | 40 | 2 1✓ |
|
GEO · Decoding the transcriptome of calcified atherosclerotic plaq...
|
Homo sapiens | — | 39 | 2 1✓ |
|
GEO
|
— | — | 39 | 1 1✓ |
|
GEO · Gene array analysis of anaplastic thyroid carcinoma tissue v...
|
Homo sapiens | — | 39 | 2 1⚑ |
|
GEO · Molecular Sampling of Prostate Cancer: a dilemma for predict...
|
Homo sapiens | — | 37 | 1 |
|
ArrayExpress
|
— | insufficient | 36 | 1 1⚑ |
|
ArrayExpress
|
— | insufficient | 34 | 1 |
|
GEO · Single-cell RNA-seq reveals AML hierarchies relevant to dise...
|
Homo sapiens | F 19 | 34 | 2 1✓ |
|
GEO · A draft map of cis-regulatory sequences in the mouse genome
|
Mus musculus | — | 34 | 1 |
|
PRIDE
|
— | insufficient | 34 | 1 1⚑ |
|
GEO · Genes and Pathways Underlying Regional and Cell Type Changes...
|
Homo sapiens | — | 33 | 1 1✓ |
|
GEO · A single-cell survey of the small intestinal epithelium
|
Mus musculus | insufficient | 32 | 1 1✓ |
|
GEO · The landscape of pharmacogenomic interactions in human cance...
|
Homo sapiens | — | 31 | 1 1✓ |
|
GEO · Adult mouse cortical cell taxonomy by single cell transcript...
|
Mus musculus | B 87 | 31 | 1 |
|
GEO · Identifying novel drivers of human hepatocellular carcinoma...
|
Homo sapiens | — | 31 | 1 1⚑ |
|
GCA
|
— | — | 30 | 1 1✓ |
|
GEO · Endometriosis transcription profiling
|
Homo sapiens | — | 30 | 1 |
|
GEO · Expression data for Nonalcoholic fatty liver disease patient...
|
Homo sapiens | — | 30 | 1 1⚑ |
|
GEO · Comprehensive genomic analysis identify novel subtypes and t...
|
Homo sapiens | — | 30 | 1 1✓ |
|
GEO · Normal and Renal Cell Carcinoma Kidney Tissue, Human
|
Homo sapiens | — | 30 | 1 1✓ |
|
GEO · Dissecting the human liver cellular landscape by single cell...
|
Homo sapiens | — | 28 | 1 1⚑ |
|
GEO
|
— | — | 28 | 1 |
|
GEO · Pathways of ovarian cancer development
|
Homo sapiens | — | 28 | 1 1✓ |
|
GEO · Multiplexing droplet-based single cell RNA-sequencing using...
|
Homo sapiens | — | 28 | 1 |
|
ArrayExpress
|
— | insufficient | 27 | 1 1✓ |
|
GCA
|
— | — | 27 | 1 1✓ |
|
GEO · Colon biopsies from UC patients and healthy controls
|
Homo sapiens | insufficient | 27 | 1 |
|
GEO · RNA sequencing of the left ventricle from non-failing donors...
|
Homo sapiens | — | 27 | 1 1⚑ |
|
GCA
|
— | — | 26 | 2 2✓ |
|
PRIDE
|
— | insufficient | 26 | 1 1⚑ |
|
GEO · CITE-seq: Large scale simultaneous measuremnt of epitopes an...
|
Homo sapiens | A 100 | 25 | 1 1✓ |
|
GEO · Single-Cell Transcriptomic Analysis of Human Lung Reveals Co...
|
Homo sapiens | — | 25 | 2 1✓ |
|
GEO · Gene expression data from 62 colorectal cancers
|
Homo sapiens | — | 25 | 1 |
|
GCA
|
— | — | 24 | 1 1✓ |
|
GEO · Biobank of Karolinska Endarterectomy (BiKE)
|
Homo sapiens | — | 24 | 2 1✓ |
|
GEO · Molecular Signatures Underlying Selective Regional Vulnerabi...
|
Homo sapiens | — | 24 | 1 1✓ |
|
GEO · Simple combinations of lineage-determining transcription fac...
|
Mus musculus | insufficient | 23 | 1 1✓ |
|
ArrayExpress
|
— | insufficient | 22 | 1 1✓ |
|
GEO · Continuous Aging of the Human DNA Methylome Throughout the H...
|
Homo sapiens | — | 22 | 1 |
|
ArrayExpress
|
— | insufficient | 21 | 1 |
|
GEO · Shared and distinct transcriptomic cell types across neocort...
|
Mus musculus | insufficient | 21 | 1 |
|
GEO · Concurrent Gene Signatures for Han Chinese Breast Cancers [A...
|
Homo sapiens | — | 21 | 1 1✓ |
|
GEO · EPIC-Italy at HuGeF
|
Homo sapiens | — | 21 | 1 |
|
GEO · A single-cell atlas of the human cortex reveals drivers of t...
|
Homo sapiens | — | 20 | 1 |
|
GEO · In vivo antiviral host response to SARS-CoV-2 by viral load,...
|
Homo sapiens | A | 20 | 3 2✓ |
|
GEO · A SMAD4-modulated gene profile predicts disease-free surviva...
|
Homo sapiens | — | 20 | 1 |
|
GEO · Letrozole (Femara) early and late responses to treatment
|
Homo sapiens | — | 20 | 1 1✓ |
|
GEO · Epigenetic Landscapes in Breast Cancer Cells
|
Homo sapiens | — | 20 | 1 1✓ |
|
GEO
|
— | — | 19 | 1 1✓ |
|
GEO · Comprehensive single cell RNAseq analysis of the kidney reve...
|
Mus musculus | B 83 | 19 | 1 |
|
GEO · Chromatin interaction analysis reveals changes in small chro...
|
Homo sapiens | — | 19 | 1 1✓ |
|
GEO · CHARGE and Kabuki syndromes: Gene-specific DNA methylation s...
|
Homo sapiens | — | 19 | 1 |
|
GEO · Single cell analysis of smooth muscle cell phenotypic modula...
|
Homo sapiens | A 100 | 18 | 1 |
|
GEO · Erythroid-Specific Transcriptional Changes in PBMCs from Pul...
|
Homo sapiens | — | 18 | 1 |
|
GEO · NSD1 Mutations Generate a Genome-Wide DNA Methylation Signat...
|
Homo sapiens | — | 18 | 1 1✓ |
|
GEO · Integrative Epigenome-Wide Analysis Shows That DNA Methylati...
|
Homo sapiens | — | 18 | 1 |
|
BioProject
|
— | A 100 | 18 | 2 1✓ 1⚑ |
|
GEO · A developmental landscape of 3D-cultured human pre-gastrulat...
|
Homo sapiens | — | 17 | 1 |
|
BioProject
|
— | A 96 | 17 | 1 |
|
ArrayExpress
|
— | insufficient | 16 | 1 1✓ |