Dataset search
A search engine for scientific quality and reusable datasets: find a dataset, see what it is, how widely it is reused across the literature, and — where our agents have reproduced the papers that use it — whether it holds up. Hands-on, evidence-based, never an unbacked claim.
9,209 datasets
| Accession | Organism | QC | Reuse (literature) | Studies (✓/⚑) |
|---|---|---|---|---|
|
GEO · Gene-expression molecular subtyping of triple-negative breas...
|
Homo sapiens | — | 81 | 1 |
|
GEO · Single cell RNA-seq analysis of head and neck cancer
|
Homo sapiens | — | 80 | 3 1✓ |
|
GEO · NFAT transcriptional activity is associated with metastatic...
|
Homo sapiens | — | 79 | 1 |
|
GEO · Single cell 3' RNA sequencing of 23 Korean colorectal cancer...
|
Homo sapiens | insufficient | 77 | 1 1✓ |
|
GEO · AMC colon cancer AJCCII
|
Homo sapiens | — | 77 | 1 |
|
GEO · Clinical Value of RNA Sequencing–Based Classifiers for Predi...
|
Homo sapiens | — | 77 | 3 1✓ 1⚑ |
|
GCA
|
— | — | 76 | 1 1✓ |
|
GEO · Differential DNA Methylation in Purified Human Blood Cells
|
Homo sapiens | insufficient | 76 | — |
|
GEO · Genome-wide blood transcriptional profiling in critically il...
|
Homo sapiens | — | 76 | 1 |
|
GEO
|
— | insufficient | 75 | 2 1✓ |
|
GEO · Tracing pluripotency of human early embryos and embryonic st...
|
Homo sapiens | A | 74 | 1 |
|
GEO · Genome-wide Methylation Profiles Reveal Quantitative Views o...
|
Homo sapiens | — | 74 | 2 |
|
GEO · Mapping of transcription factor binding sites in mouse embry...
|
Mus musculus | — | 73 | 2 1✓ |
|
GEO
|
— | — | 72 | 3 1✓ 1⚑ |
|
GEO · Identification of inter-individual and gene-specific varianc...
|
Homo sapiens | — | 72 | 1 1⚑ |
|
GEO · scRNA-seq profiling of breast cancer tumors, BRCA1 mutant pr...
|
Homo sapiens | — | 72 | 1 1✓ |
|
GEO · Mucosal expression profiling in patients with inflammatory b...
|
Homo sapiens | — | 71 | 1 1✓ |
|
GEO · Differential DNA methylation in Rheumatoid arthritis
|
Homo sapiens | — | 71 | 3 1✓ |
|
GEO · Genome-wide analysis of hepatic gene expression in patients...
|
Homo sapiens | — | 71 | 1 1⚑ |
|
GEO · Fractalkine receptor CX3CR1 and leukocyte Ig-like receptor B...
|
Homo sapiens | — | 71 | 2 1✓ |
|
GEO · A single-cell transcriptomic map of the human and mouse panc...
|
Homo sapiens; Mus musculus | A | 70 | 1 1✓ |
|
GEO · Analysis of gene expression in esophageal squamous cell carc...
|
Homo sapiens | — | 69 | 1 1⚑ |
|
GEO · The Mutational Landscape of Lethal Castrate Resistant Prosta...
|
Homo sapiens | — | 68 | 1 1✓ |
|
GEO · Integrative Genomic and Proteomic Analysis of Prostate Cance...
|
Homo sapiens | — | 67 | 1 1✓ |
|
GEO · Prognostic gene signature for AML
|
Homo sapiens | — | 67 | 2 1✓ |
|
GEO · Expression data from Breast cancer subtypes
|
Homo sapiens | insufficient | 67 | 1 1✓ |
|
GEO · Expression data from human brain tumors and human normal bra...
|
Homo sapiens | A | 66 | 1 1✓ |
|
BioProject
|
— | — | 65 | 1 1✓ |
|
GCA
|
— | — | 62 | 1 1✓ |
|
GEO · L1000 Connectivity Map perturbational profiles from Broad In...
|
Homo sapiens | — | 62 | 1 |
|
GEO · Control of oxidative stress by miRNA and impact on ovarian t...
|
Homo sapiens | — | 60 | 1 1✓ |
|
GEO · Development and Validation of a Novel Molecular Biomarker Di...
|
Homo sapiens | — | 60 | 2 1✓ |
|
GEO · A seven-gene signature aggregates a subgroup of stage II col...
|
Homo sapiens | — | 60 | 1 |
|
GEO · Human endometriosis vs normal endometrium study - transcript...
|
Homo sapiens | — | 59 | 1 |
|
GEO · Single cell RNA sequencing of primary breast cancer.
|
Homo sapiens | A | 58 | 2 1✓ |
|
GEO · Glioblastoma from a homogenous cohort of patients treated wi...
|
Homo sapiens | A | 58 | 1 1✓ |
|
GEO · Genomic Multivariate Predictors of Response to Adjuvant Chem...
|
Homo sapiens | — | 57 | 1 1✓ |
|
GEO · Alternatively processed and compiled RNA-Sequencing and cli...
|
Homo sapiens | insufficient | 57 | — |
|
GEO · Colorectal cancer susceptibility loci as predictive markers...
|
Homo sapiens | — | 57 | 2 1✓ |
|
GEO · Single-cell RNA-seq of melanoma ecosystems reveals sources o...
|
Homo sapiens | — | 54 | 1 |
|
GEO · single cell RNA-seq analysis of adult and paediatric IDH-wil...
|
Homo sapiens | A | 53 | 1 1✓ |
|
GEO · Type I Interferon: Potential Therapeutic Target for Psoriasi...
|
Homo sapiens | — | 53 | 1 |
|
GEO · A single-cell transcriptome atlas of the human pancreas [CEL...
|
Homo sapiens | — | 52 | 1 1✓ |
|
GEO · Microarray analyses of laser-captured hippocampus reveal dis...
|
Homo sapiens | A | 51 | 1 1✓ |
|
ArrayExpress
|
— | insufficient | 50 | 1 |
|
GEO · Large-scale Multi-omic Analysis of COVID-19 Severity
|
Homo sapiens | B | 50 | 2 1✓ |
|
GEO · Expression data from post mortem Alzheimer's disease brains
|
Homo sapiens | — | 50 | 1 1✓ |
|
GEO · PTC versus paired normal thyroid tissue
|
Homo sapiens | — | 49 | 1 |
|
GEO · Genome Wide Expression Analysis of Middle Eastern Colorectal...
|
Homo sapiens | — | 48 | 1 1✓ 1⚑ |
|
GEO · Expression data from colorectal cancers
|
Homo sapiens | insufficient | 47 | 1 |
|
GEO · Expression data from primary colorectal cancers
|
Homo sapiens | — | 47 | 1 |
|
GEO · A Prognostic Gene Expression Index in Ovarian Cancer
|
Homo sapiens | — | 47 | 1 1✓ |
|
GEO · Single-Cell RNAseq analysis of diffuse neoplastic infiltrati...
|
Homo sapiens | — | 47 | 1 |
|
GEO · RNA Sequencing of Single Human Islet Cells Reveals Type 2 Di...
|
Homo sapiens | insufficient | 46 | — |
|
GEO · Gene expression profiling of oral squamous cell carcinoma (O...
|
Homo sapiens | — | 45 | 1 1⚑ |
|
GEO · Highly parallel genome-wide expression profiling of individu...
|
Homo sapiens; Mus musculus; synthetic construct | insufficient | 45 | — |
|
GEO · Defining T cell states associated with response to checkpoin...
|
Homo sapiens | — | 44 | 1 |
|
GEO · Expression data from human breast tumors and their paired no...
|
Homo sapiens | — | 43 | 1 1✓ |
|
GEO · Validated Gene Expression Signatures of Idiopathic Pulmonary...
|
Homo sapiens | — | 43 | 1 1⚑ |
|
GEO · Sporadic vs. Post-Chernobyl Papillary vs. Anaplastic Thyroid...
|
Homo sapiens | — | 43 | 1 1⚑ |