Dataset search

A search engine for scientific quality and reusable datasets: find a dataset, see what it is, how widely it is reused across the literature, and — where our agents have reproduced the papers that use it — whether it holds up. Hands-on, evidence-based, never an unbacked claim.

Publications 1.3k Datasets 80 Experiments 4.7k

80 datasets

Accession	Organism	QC	Reuse (literature)	Studies (✓/⚑)
GPL10558 GEO	—	insufficient	402	6 3✓ 1⚑
E-MTAB-513 ArrayExpress	—	insufficient	99	1
GSE30784 GEO · Gene expression profiling of oral squamous cell carcinoma (O...	Homo sapiens	insufficient	96	1 1⚑
GPL1261 GEO	—	insufficient	88	3 2✓
GSE132465 GEO · Single cell 3' RNA sequencing of 23 Korean colorectal cancer...	Homo sapiens	insufficient	77	1 1✓
GPL13534 GEO	—	insufficient	75	2 1✓
GSE45827 GEO · Expression data from Breast cancer subtypes	Homo sapiens	insufficient	67	1 1✓
GSE16256 GEO · UCSD Human Reference Epigenome Mapping Project	Homo sapiens	insufficient	56	1 1✓
E-MTAB-5061 ArrayExpress	—	insufficient	50	1
GSE31477 GEO · ENCODE Transcription Factor Binding Sites by ChIP-seq from S...	Homo sapiens	insufficient	48	1 1✓
GSE12945 GEO · Expression data from colorectal cancers	Homo sapiens	insufficient	47	1
E-MTAB-2836 ArrayExpress	—	insufficient	36	1 1⚑
E-MTAB-3929 ArrayExpress	—	insufficient	34	1
PXD000561 PRIDE	—	insufficient	34	1 1⚑
GSE92332 GEO · A single-cell survey of the small intestinal epithelium	Mus musculus	insufficient	32	1 1✓
GPL2025 GEO	—	insufficient	30	1 1✓
E-MTAB-6814 ArrayExpress	—	insufficient	27	1 1✓
GSE11223 GEO · Colon biopsies from UC patients and healthy controls	Homo sapiens	insufficient	27	1
GSE29623 GEO · mRNA and microRNA profile in colon cancer	Homo sapiens	insufficient	27	1
PXD010154 PRIDE	—	insufficient	26	1 1⚑
GSE21512 GEO · Simple combinations of lineage-determining transcription fac...	Mus musculus	insufficient	23	1 1✓
E-MTAB-2706 ArrayExpress	—	insufficient	22	1 1✓
E-MTAB-3610 ArrayExpress	—	insufficient	21	1
GSE115746 GEO · Shared and distinct transcriptomic cell types across neocort...	Mus musculus	insufficient	21	1
GSE6269 GEO · Gene expression patterns in blood leukocytes discriminate pa...	Homo sapiens	insufficient	21	1 1✓
GSE37250 GEO · Genome-wide transcriptional profiling of HIV positive and ne...	Homo sapiens	insufficient	19	1 1✓
E-MTAB-2770 ArrayExpress	—	insufficient	16	1 1✓
GSE35681 GEO · ChIP-seq and mRNA-seq experiment to find the direct target g...	Mus musculus	insufficient	16	1 1✓
GSE20898 GEO · Genome-wide Analyses of Transcription Factor GATA3-Mediated...	Mus musculus	insufficient	15	1 1✓
E-MTAB-365 ArrayExpress	—	insufficient	13	1 1⚑
GSE20012 GEO · Deciphering the cis-regulatory architecture of mammalian pho...	Mus musculus	insufficient	12	1 1✓
GSE21978 GEO · A global network of transcription factors, involving E2A, EB...	Mus musculus	insufficient	12	1 1✓
GSE29422 GEO · Chromatin and Transcriptional Signatures for Nodal Signaling...	Homo sapiens	insufficient	12	1 1✓
E-MTAB-264 ArrayExpress	—	insufficient	11	1 1✓
GSE113197 GEO · Single Cell RNA sequencing of Adult Human Breast Epithelial...	Homo sapiens	insufficient	11	1 1✓
GSE132042 GEO · Tabula Muris	Mus musculus	insufficient	11	3 2✓
GSE17156 GEO · Gene expression signatures of symptomatic respiratory viral...	Homo sapiens	insufficient	11	1 1✓
GSE68310 GEO	—	insufficient	11	1 1✓
GSE80280 GEO · 3D structures of individual mammalian genomes reveal princip...	Mus musculus	insufficient	11	1 1✓
GSE20346 GEO · Expression profiling of critically ill influenza and bacteri...	Homo sapiens	insufficient	10	1 1✓
GSE206285 GEO · Efficacy and safety of ustekinumab treatment in patients wit...	Homo sapiens	insufficient	9	1 1✓
GSE37350 GEO · Altered Subcellular Localization of Transcription Factor TEA...	Mus musculus	insufficient	9	1 1✓
GSE73072 GEO	—	insufficient	9	1 1✓
GSE13485 GEO · Profiling 20,077 genes in 25 vaccine recipients: U133 Plus 2...	Homo sapiens	insufficient	8	2 1✓
GSE6863 GEO · Immature dendritic cells under hypoxic condition	Homo sapiens	insufficient	8	1
GSE16997 GEO · Gene expression profiles of normal human mammary cell subpop...	Homo sapiens	insufficient	7	1 1✓
GSE29042 GEO · Expression profiling of mice exposed to multiwalled carbon n...	Mus musculus	insufficient	7	1 1✓
GSE38900 GEO	—	insufficient	7	1 1✓
GSE60149 GEO · Global hepatic transcript data from fasted male BXD strains...	Mus musculus	insufficient	7	1 1✓
GSE107995 GEO · A modular transcriptional signature identifies phenotypic he...	Homo sapiens	insufficient	6	1 1✓
GSE2748 GEO	—	insufficient	6	1 1✓
GSE32673 GEO	—	insufficient	6	1 1✓
GSE48068 GEO	—	insufficient	6	1 1✓
GSE93421 GEO	—	insufficient	6	2 1✓
GSE131776 GEO · Single cell analysis of smooth muscle cell phenotypic modula...	Mus musculus	insufficient	5	1
GSE150861 GEO · Single-cell RNA-seq of PBMCs from severe COVID-19 patients	Homo sapiens	insufficient	5	1 1✓
GSE171820 GEO · Human blastocyst model by self-organization of naïve pluripo...	Homo sapiens	insufficient	5	1
SRP000941 ENA	—	insufficient	5	1 1✓
GSE121141 GEO · A whole lifespan mouse multi-tissue DNA methylation clock	Mus musculus	insufficient	4	1 1✓
GSE13845 GEO · ChIP-seq Accurately Predicts Tissue-Specific Activity of Enh...	Mus musculus	insufficient	4	1 1✓