Dataset search
A search engine for scientific quality and reusable datasets: find a dataset, see what it is, how widely it is reused across the literature, and — where our agents have reproduced the papers that use it — whether it holds up. Hands-on, evidence-based, never an unbacked claim.
161 datasets
| Accession | Organism | QC | Reuse (literature) | Studies (✓/⚑) |
|---|---|---|---|---|
|
GEO
|
— | — | 2,002 | 17 8✓ 3⚑ |
|
GEO
|
— | — | 727 | 8 3✓ 2⚑ |
|
GEO · Gene expression Classification of Colon Cancer defines six m...
|
Homo sapiens | — | 410 | 2 1✓ |
|
GEO
|
— | insufficient | 402 | 6 3✓ 1⚑ |
|
GEO
|
— | — | 398 | 8 3✓ 1⚑ |
|
GEO
|
— | — | 258 | 5 2✓ 1⚑ |
|
GEO · A three-dimensional map of the human genome at kilobase reso...
|
Homo sapiens; Mus musculus | A | 226 | 2 2✓ |
|
GEO · Strong Time Dependence of the 76-Gene Prognostic Signature
|
Homo sapiens | A | 217 | 3 2✓ 1⚑ |
|
GEO
|
— | — | 201 | 5 1⚑ |
|
GEO · Expression Project for Oncology (expO)
|
Homo sapiens | — | 130 | 2 1✓ |
|
GEO · Molecular portraits of tumor mutational and micro-environmen...
|
Homo sapiens | — | 117 | 3 1✓ 1⚑ |
|
GEO · A single-cell and spatially resolved atlas of human breast c...
|
Homo sapiens | A | 113 | 4 2✓ |
|
GEO · Single cell RNA-seq analysis of melanoma
|
Homo sapiens | — | 101 | 4 2✓ |
|
GEO · Gene expression profiling of oral squamous cell carcinoma (O...
|
Homo sapiens | insufficient | 96 | 1 1⚑ |
|
GEO
|
— | insufficient | 88 | 3 2✓ |
|
GEO · Prognostic gene signature for normal karyotype AML
|
Homo sapiens | — | 87 | 2 1✓ |
|
GEO · Alzheimer's Disease Dataset
|
Homo sapiens | — | 87 | 2 1✓ |
|
GEO
|
— | insufficient | 75 | 2 1✓ |
|
GEO · Genome-wide Methylation Profiles Reveal Quantitative Views o...
|
Homo sapiens | — | 74 | 2 |
|
GEO · Mapping of transcription factor binding sites in mouse embry...
|
Mus musculus | — | 73 | 2 1✓ |
|
GEO
|
— | — | 72 | 3 1✓ 1⚑ |
|
GEO · Mucosal expression profiling in patients with inflammatory b...
|
Homo sapiens | — | 71 | 1 1✓ |
|
GEO · Differential DNA methylation in Rheumatoid arthritis
|
Homo sapiens | — | 71 | 3 1✓ |
|
GEO · Prognostic gene signature for AML
|
Homo sapiens | — | 67 | 2 1✓ |
|
GEO · Development and Validation of a Novel Molecular Biomarker Di...
|
Homo sapiens | — | 60 | 2 1✓ |
|
GEO · Single cell RNA sequencing of primary breast cancer.
|
Homo sapiens | A | 58 | 2 1✓ |
|
GEO · Type I Interferon: Potential Therapeutic Target for Psoriasi...
|
Homo sapiens | — | 53 | 1 |
|
GEO · Microarray analyses of laser-captured hippocampus reveal dis...
|
Homo sapiens | A | 51 | 1 1✓ |
|
GEO · Large-scale Multi-omic Analysis of COVID-19 Severity
|
Homo sapiens | B | 50 | 2 1✓ |
|
GEO · Expression data from post mortem Alzheimer's disease brains
|
Homo sapiens | — | 50 | 1 1✓ |
|
GEO · ENCODE Transcription Factor Binding Sites by ChIP-seq from S...
|
Homo sapiens | insufficient | 48 | 1 1✓ |
|
GEO · Gene expression profiling of oral squamous cell carcinoma (O...
|
Homo sapiens | — | 45 | 1 1⚑ |
|
GEO · Decoding the transcriptome of calcified atherosclerotic plaq...
|
Homo sapiens | — | 39 | 2 1✓ |
|
GEO · Single-cell RNA-seq reveals AML hierarchies relevant to dise...
|
Homo sapiens | F 19 | 34 | 2 1✓ |
|
GEO · Genes and Pathways Underlying Regional and Cell Type Changes...
|
Homo sapiens | — | 33 | 1 1✓ |
|
GEO · A single-cell survey of the small intestinal epithelium
|
Mus musculus | insufficient | 32 | 1 1✓ |
|
GEO · The landscape of pharmacogenomic interactions in human cance...
|
Homo sapiens | — | 31 | 1 1✓ |
|
GEO · Dissecting the human liver cellular landscape by single cell...
|
Homo sapiens | — | 28 | 1 1⚑ |
|
GEO · Multiplexing droplet-based single cell RNA-sequencing using...
|
Homo sapiens | — | 28 | 1 |
|
GEO · Colon biopsies from UC patients and healthy controls
|
Homo sapiens | insufficient | 27 | 1 |
|
GEO · RNA sequencing of the left ventricle from non-failing donors...
|
Homo sapiens | — | 27 | 1 1⚑ |
|
GEO
|
— | — | 26 | 3 1⚑ |
|
GEO · Single-Cell Transcriptomic Analysis of Human Lung Reveals Co...
|
Homo sapiens | — | 25 | 2 1✓ |
|
GEO · Biobank of Karolinska Endarterectomy (BiKE)
|
Homo sapiens | — | 24 | 2 1✓ |
|
GEO · Molecular Signatures Underlying Selective Regional Vulnerabi...
|
Homo sapiens | — | 24 | 1 1✓ |
|
GEO · Simple combinations of lineage-determining transcription fac...
|
Mus musculus | insufficient | 23 | 1 1✓ |
|
GEO · Continuous Aging of the Human DNA Methylome Throughout the H...
|
Homo sapiens | — | 22 | 1 |
|
GEO · EPIC-Italy at HuGeF
|
Homo sapiens | — | 21 | 1 |
|
GEO · A single-cell atlas of the human cortex reveals drivers of t...
|
Homo sapiens | — | 20 | 1 |
|
GEO · In vivo antiviral host response to SARS-CoV-2 by viral load,...
|
Homo sapiens | A | 20 | 3 2✓ |
|
GEO · Epigenetic Landscapes in Breast Cancer Cells
|
Homo sapiens | — | 20 | 1 1✓ |
|
GEO
|
— | — | 19 | 1 1✓ |
|
GEO · Comprehensive single cell RNAseq analysis of the kidney reve...
|
Mus musculus | B 83 | 19 | 1 |
|
GEO · Chromatin interaction analysis reveals changes in small chro...
|
Homo sapiens | — | 19 | 1 1✓ |
|
GEO · CHARGE and Kabuki syndromes: Gene-specific DNA methylation s...
|
Homo sapiens | — | 19 | 1 |
|
GEO · Integrative Epigenome-Wide Analysis Shows That DNA Methylati...
|
Homo sapiens | — | 18 | 1 |
|
GEO
|
— | — | 17 | 1 |
|
GEO
|
— | — | 17 | 3 1✓ 1⚑ |
|
GEO · ChIP-seq and mRNA-seq experiment to find the direct target g...
|
Mus musculus | insufficient | 16 | 1 1✓ |
|
GEO · Timecourse of estradiol (10nM) exposure in MCF7 breast cance...
|
Homo sapiens | — | 15 | 1 1✓ |