Dataset search
A search engine for scientific quality and reusable datasets: find a dataset, see what it is, how widely it is reused across the literature, and — where our agents have reproduced the papers that use it — whether it holds up. Hands-on, evidence-based, never an unbacked claim.
1,735 datasets
| Accession | Organism | QC | Reuse (literature) | Studies (✓/⚑) |
|---|---|---|---|---|
|
GEO · Mapping of transcription factor binding sites in mouse embry...
|
Mus musculus | — | 73 | 2 1✓ |
|
GEO · A draft map of cis-regulatory sequences in the mouse genome
|
Mus musculus | — | 34 | 1 |
|
GEO · A single-cell survey of the small intestinal epithelium
|
Mus musculus | insufficient | 32 | 1 1✓ |
|
GEO · Shared and distinct transcriptomic cell types across neocort...
|
Mus musculus | insufficient | 21 | 1 |
|
GEO · Transcriptional heterogeneity and lineage commitment in myel...
|
Mus musculus | — | 18 | — |
|
GEO · Control of Embryonic Stem Cell State by Mediator and Cohesin...
|
Mus musculus | — | 17 | — |
|
GEO · Single-cell RNA-seq analysis unveils a prevalent epithelial/...
|
Mus musculus | — | 17 | — |
|
GEO · Cooperative binding of Oct4, Sox2, and Klf4 with stage-speci...
|
Mus musculus | — | 17 | — |
|
GEO · High-temporal resolution profiling of mouse liver
|
Mus musculus | — | 16 | — |
|
GEO · Distinct features in establishing H3K4me3 and H3K27me3 in pr...
|
Mus musculus | — | 16 | — |
|
GEO · Allelic reprogramming of 3D chromatin architecture during ea...
|
Mus musculus | — | 16 | — |
|
GEO · ImmGen ULI: Systemwide RNA-seq profiles (#1)
|
Mus musculus | — | 15 | — |
|
GEO · Genome-wide chromatin state maps of ES cells, ES-derived neu...
|
Mus musculus | — | 15 | — |
|
GEO · The dynamic transcriptional landscape of mammalian organogen...
|
Mus musculus | — | 15 | — |
|
GEO · Comprehensive single-cell mRNA profiling reveals a detailed...
|
Mus musculus | — | 15 | — |
|
GEO · Single-cell RNA-seq reveals the transcriptional landscape in...
|
Mus musculus | — | 15 | — |
|
GEO · Long RNA-seq from ENCODE/Cold Spring Harbor Lab
|
Mus musculus | insufficient | 15 | — |
|
GEO · Tissue-specific methylomes reveal epigenetic memory in adult...
|
Mus musculus | — | 15 | — |
|
GEO · Programming and inheritance of parental DNA methylomes in ma...
|
Mus musculus | insufficient | 15 | — |
|
GEO · The landscape of accessible chromatin in mammalian pre-impla...
|
Mus musculus | — | 15 | — |
|
GEO · ImmGen ATAC-seq data
|
Mus musculus | — | 14 | — |
|
GEO · Cardiac transcription factors in HL-1 cells: gene expression...
|
Mus musculus | — | 14 | — |
|
GEO · Epigenome and transcriptome of naive pluripotent mouse embry...
|
Mus musculus | — | 14 | — |
|
GEO · Cell fate inclination within 2-cell and 4-cell mouse embryos...
|
Mus musculus | — | 14 | — |
|
GEO · Epigenomic Signatures of Neuronal Diversity in the Mammalian...
|
Mus musculus | — | 14 | — |
|
GEO · Single-cell RNA-seq of mouse hypothalamus
|
Mus musculus | — | 14 | — |
|
GEO · Using DNA methylation profiling to evaluate biological age a...
|
Mus musculus | — | 14 | — |
|
GEO · Single-cell full-length total RNA sequencing uncovers dynami...
|
Mus musculus | — | 14 | — |
|
GEO · Single cell profiling reveals sex, lineage and regional dive...
|
Mus musculus | — | 13 | — |
|
GEO · Dynamic, sex-differential STAT5 and BCL6 binding to sex-bias...
|
Mus musculus | — | 13 | — |
|
GEO · Genetic recombination is directed away from functional genet...
|
Mus musculus | — | 13 | — |
|
GEO · Master Transcription Factors and Mediator Establish Super-En...
|
Mus musculus | insufficient | 13 | — |
|
GEO · Transcriptome profile of a murine renal bilateral ischemia r...
|
Mus musculus | — | 13 | — |
|
GEO · Molecular, Spatial and Functional Single-Cell Profiling of t...
|
Mus musculus | insufficient | 12 | — |
|
GEO · A Single-Cell Atlas of Cell Types, States, and Other Transcr...
|
Mus musculus | — | 12 | — |
|
GEO · Single-cell transcriptomic profiling of the aging mouse brai...
|
Mus musculus | — | 12 | 1 |
|
GEO · Hybrid Mouse diversity Panel Liver Expression Profile
|
Mus musculus | — | 12 | — |
|
GEO · A comparative encyclopedia of DNA elements in the mouse geno...
|
Mus musculus | — | 12 | — |
|
GEO · Temporal gene expression across osteoblastogenesis.
|
Mus musculus | — | 12 | — |
|
GEO · The landscape of accessible chromatin in mammalian pre-impla...
|
Mus musculus | — | 12 | — |
|
GEO · Mammalian sperm exhibit epigenetic priming of embryonic and...
|
Mus musculus | — | 12 | — |
|
GEO · Developmental emergence of adult neural stem cells as reveal...
|
Mus musculus | — | 11 | — |
|
GEO · A comprehensive roadmap of spermatogenesis and testis niche...
|
Mus musculus | — | 11 | — |
|
GEO · The emergent landscape of the mouse gut endoderm at single-c...
|
Mus musculus | — | 11 | — |
|
GEO · A cellular taxonomy of the bone marrow stroma in homeostasis...
|
Mus musculus | — | 11 | 2 |
|
GEO · Tabula Muris
|
Mus musculus | insufficient | 11 | 3 2✓ |
|
GEO · Cell profiling of acute kidney injury reveals conserved cell...
|
Mus musculus | — | 11 | — |
|
GEO · Reorganization of nuclear lamina – genome interactions upon...
|
Mus musculus | — | 11 | — |
|
GEO · A draft map of cis-regulatory sequences in the mouse genome...
|
Mus musculus | — | 11 | — |
|
GEO · ImmGen Microarray Phase 2
|
Mus musculus | — | 11 | — |
|
GEO · Transcriptional Architecture and Chromatin Landscape of the...
|
Mus musculus | — | 11 | — |
|
GEO · Master Transcription Factors and Mediator Establish Super-En...
|
Mus musculus | — | 11 | — |
|
GEO · Genome-wide dynamics of Pol II elongation and its interplay...
|
Mus musculus | — | 11 | 1 1⚑ |
|
GEO · Rapid and Pervasive Changes in Genome-Wide Enhancer Usage Du...
|
Mus musculus | — | 11 | 1 |
|
GEO · Spinal Cord Injury Murine Model
|
Mus musculus | — | 11 | — |
|
GEO · Genome-wide distribution and function of ATP-dependent chrom...
|
Mus musculus | insufficient | 11 | — |
|
GEO · A Transcriptome Database for Astrocytes, Neurons, and Oligod...
|
Mus musculus | — | 11 | — |
|
GEO · Single-cell RNA-Seq Analysis of Retinal Development Identifi...
|
Mus musculus | — | 10 | — |
|
GEO · Single-cell analysis of cardiogenesis reveals basis for orga...
|
Mus musculus | — | 10 | 1 1✓ |
|
GEO · Mechanisms Establishing TLR4-Responsive Activation States of...
|
Mus musculus | — | 10 | — |