Dataset search
A search engine for scientific quality and reusable datasets: find a dataset, see what it is, how widely it is reused across the literature, and — where our agents have reproduced the papers that use it — whether it holds up. Hands-on, evidence-based, never an unbacked claim.
281 datasets
| Accession | Organism | QC | Reuse (literature) | Studies (✓/⚑) |
|---|---|---|---|---|
|
GEO · UCSD Human Reference Epigenome Mapping Project
|
Homo sapiens | insufficient | 56 | 1 1✓ |
|
GEO · Multi-scale 3D genome rewiring during mouse neural developme...
|
Mus musculus | insufficient | 52 | — |
|
GEO · ENCODE Transcription Factor Binding Sites by ChIP-seq from S...
|
Homo sapiens | insufficient | 48 | 1 1✓ |
|
GEO · Histone Modifications by ChIP-seq from ENCODE/LICR
|
Mus musculus | insufficient | 35 | — |
|
GEO · Genome-wide maps of chromatin state in pluripotent and linea...
|
Mus musculus | insufficient | 33 | — |
|
GEO · Allelic reprogramming of the histone modification H3K4me3 in...
|
Danio rerio; Mus musculus | insufficient | 25 | — |
|
GEO · Simple combinations of lineage-determining transcription fac...
|
Mus musculus | insufficient | 23 | 1 1✓ |
|
GEO · ChIP-seq and mRNA-seq experiment to find the direct target g...
|
Mus musculus | insufficient | 16 | 1 1✓ |
|
GEO · Targeted degradation of CTCF decouples local insulation of c...
|
Mus musculus | insufficient | 16 | — |
|
GEO · DNA specificity determinants associate with distinct transcr...
|
Homo sapiens | insufficient | 13 | — |
|
GEO · Unique Broad Histone Lysine 4 Methylation Domains in Mouse O...
|
Homo sapiens; Mus musculus | insufficient | 13 | — |
|
GEO · Deciphering the cis-regulatory architecture of mammalian pho...
|
Mus musculus | insufficient | 12 | 1 1✓ |
|
GEO · A global network of transcription factors, involving E2A, EB...
|
Mus musculus | insufficient | 12 | 1 1✓ |
|
GEO · Chromatin and Transcriptional Signatures for Nodal Signaling...
|
Homo sapiens | insufficient | 12 | 1 1✓ |
|
GEO · Genome-wide profiling of PPARγ:RXR and RNA polymerase II
|
Mus musculus | insufficient | 11 | — |
|
GEO · Resetting epigenetic memory by reprogramming of histone modi...
|
Mus musculus | insufficient | 11 | — |
|
GEO · 3D structures of individual mammalian genomes reveal princip...
|
Mus musculus | insufficient | 11 | 1 1✓ |
|
GEO · Genome-wide map of H3K4me3 in 12 day post-partum mouse sperm...
|
Mus musculus | insufficient | 10 | — |
|
GEO · Identification of in vivo DNA-binding mechanisms of Pax6 and...
|
Mus musculus | insufficient | 10 | — |
|
GEO
|
— | insufficient | 10 | — |
|
GEO · Single-cell RNA-seq Uncovers Dynamic Processes and Critical...
|
Mus musculus | insufficient | 9 | — |
|
GEO · Altered Subcellular Localization of Transcription Factor TEA...
|
Mus musculus | insufficient | 9 | 1 1✓ |
|
GEO · Conserved epigenomic signatures between mouse and human eluc...
|
Mus musculus | insufficient | 9 | — |
|
GEO
|
— | insufficient | 9 | — |
|
GEO · Comparative profiling of chromatin state maps and transcript...
|
Homo sapiens | insufficient | 8 | — |
|
GEO
|
— | insufficient | 8 | — |
|
GEO
|
— | insufficient | 8 | — |
|
GEO
|
— | insufficient | 8 | — |
|
GEO
|
— | insufficient | 7 | — |
|
GEO · High resolution chromatin dynamics during a yeast stress res...
|
Saccharomyces cerevisiae | insufficient | 7 | — |
|
GEO · Diurnal changes of HDAC3, Rev-erbα, NCoR and Pol II recruitm...
|
Mus musculus | insufficient | 6 | — |
|
GEO
|
— | insufficient | 6 | 1 1✓ |
|
GEO
|
— | insufficient | 6 | 1 1✓ |
|
GEO · NeuroD2 ChIP-SEQ from embryonic cortex
|
Mus musculus | insufficient | 6 | — |
|
GEO · GATA3-mediated chromatin reprogramming in breast cancer cell...
|
Homo sapiens | insufficient | 6 | — |
|
GEO · Hierarchy within the mammary STAT5-driven Wap super-enhancer
|
Mus musculus | insufficient | 6 | — |
|
GEO · Mll3 and Mll4 facilitate enhancer RNA synthesis and transcri...
|
Mus musculus | insufficient | 6 | — |
|
GEO
|
— | insufficient | 6 | — |
|
GEO
|
— | insufficient | 6 | — |
|
GEO · High-throughput single-cell ChIP-seq identifies heterogeneit...
|
Homo sapiens; Mus musculus | insufficient | 5 | — |
|
GEO
|
— | insufficient | 5 | — |
|
GEO · esBAF is an essential component of the core pluripotency tra...
|
Mus musculus | insufficient | 5 | — |
|
GEO
|
— | insufficient | 5 | — |
|
GEO · Dynamic epigenetic enhancer signatures are predictive for ke...
|
Homo sapiens | insufficient | 5 | — |
|
GEO · Identification of Cux2 binding sites in female and male mous...
|
Mus musculus | insufficient | 5 | — |
|
GEO · Unraveling the KNOTTED1 regulatory network in maize meristem...
|
Zea mays | insufficient | 5 | — |
|
GEO · Study of Topoisomerase I in human
|
Homo sapiens | insufficient | 5 | — |
|
GEO · Epigenetic and genetic features that lead to discovery of en...
|
Mus musculus | insufficient | 5 | — |
|
GEO · Sox10 Binding Analysis in the Central and Peripheral Nervous...
|
Rattus norvegicus | insufficient | 5 | — |
|
GEO
|
— | insufficient | 5 | — |
|
GEO · Distinct roles of cohesin-SA1 and cohesin-SA2 in 3D chromoso...
|
Homo sapiens | insufficient | 4 | — |
|
GEO · Comprehensive analysis of H3K9me2 oocytes, together with DNA...
|
Mus musculus | insufficient | 4 | — |
|
GEO · ChIP-seq Accurately Predicts Tissue-Specific Activity of Enh...
|
Mus musculus | insufficient | 4 | 1 1✓ |
|
GEO
|
— | insufficient | 4 | — |
|
GEO · Enhancer Activation Requires Trans-Recruitment of a Mega Tra...
|
Homo sapiens | insufficient | 4 | — |
|
GEO · ChIP-seq of H3K27ac and CTCF in primary glioblastoma culture...
|
Homo sapiens | insufficient | 3 | — |
|
GEO · Polycomb Protein Ezh1 Promotes RNA Polymerase II Elongation
|
Mus musculus | insufficient | 3 | — |
|
GEO
|
— | insufficient | 3 | — |
|
GEO
|
— | insufficient | 3 | — |
|
GEO · NF-kB coordinates rapid, BRD4-dependent remodeling of proinf...
|
Homo sapiens | insufficient | 3 | — |