Dataset search
A search engine for scientific quality and reusable datasets: find a dataset, see what it is, how widely it is reused across the literature, and — where our agents have reproduced the papers that use it — whether it holds up. Hands-on, evidence-based, never an unbacked claim.
1,107 datasets
| Accession | Organism | QC | Reuse (literature) | Studies (✓/⚑) |
|---|---|---|---|---|
|
GEO · Single cell 3' RNA sequencing of 23 Korean colorectal cancer...
|
Homo sapiens | insufficient | 77 | 1 1✓ |
|
GEO · Alternatively processed and compiled RNA-Sequencing and cli...
|
Homo sapiens | insufficient | 57 | — |
|
GEO · RNA Sequencing of Single Human Islet Cells Reveals Type 2 Di...
|
Homo sapiens | insufficient | 46 | — |
|
GEO · Highly parallel genome-wide expression profiling of individu...
|
Homo sapiens; Mus musculus; synthetic construct | insufficient | 45 | — |
|
GEO · An Investigation of Biomarkers Derived from Legacy Microarra...
|
Homo sapiens | insufficient | 41 | — |
|
GEO · Single cell 3' RNA sequencing of 6 Belgian colorectal cancer...
|
Homo sapiens | insufficient | 39 | — |
|
GEO · Droplet barcoding for single cell transcriptomics applied to...
|
Homo sapiens; Mus musculus | insufficient | 35 | — |
|
GEO · A glioma immune cell atlas identifies prognostic macrophage...
|
Homo sapiens | insufficient | 34 | — |
|
GEO · A single-cell survey of the small intestinal epithelium
|
Mus musculus | insufficient | 32 | 1 1✓ |
|
GEO · Understanding tumor evolution and its clonality by single-ce...
|
Homo sapiens | insufficient | 31 | — |
|
GEO · Reference component analysis of single-cell transcriptomes e...
|
Homo sapiens | insufficient | 31 | — |
|
GEO · Single cell transcriptomics defines human islet cell signatu...
|
Homo sapiens | insufficient | 28 | — |
|
GEO
|
— | insufficient | 26 | — |
|
GEO · Mutational and neoantigen load predict clinical benefit of a...
|
Homo sapiens | insufficient | 25 | — |
|
GEO · T cell landscape of non-small cell lung cancer revealed by d...
|
Homo sapiens | insufficient | 24 | — |
|
GEO · Comprehensive Profiling of Cancer Cells and Their Microenvir...
|
Homo sapiens | insufficient | 23 | — |
|
GEO · RNA-Seq reveals an unprecedented complexity of the neuroblas...
|
Homo sapiens | insufficient | 22 | — |
|
GEO · Single-cell Map of Diverse Immune Phenotypes in the Breast T...
|
Homo sapiens | insufficient | 21 | — |
|
GEO · Shared and distinct transcriptomic cell types across neocort...
|
Mus musculus | insufficient | 21 | 1 |
|
GEO · Single-cell RNA sequencing of human kidney
|
Homo sapiens | insufficient | 21 | — |
|
GEO · Multi-omic analysis of subtype evolution and heterogeneity i...
|
Homo sapiens | insufficient | 20 | — |
|
GEO · Clinical Value of RNA Sequencing–Based Classifiers for Predi...
|
Homo sapiens | insufficient | 20 | — |
|
GEO · Single Cell and Spatial Analysis of Human Squamous Cell Carc...
|
Homo sapiens | insufficient | 19 | — |
|
GEO · Delineating copy number and clonal substructure in human tum...
|
Homo sapiens | insufficient | 18 | — |
|
GEO · RNA-Seq Identifies Novel Myocardial Gene Expression Signatur...
|
Homo sapiens | insufficient | 18 | — |
|
GEO
|
— | insufficient | 16 | — |
|
GEO · Integrated single cell analysis of blood and cerebrospinal f...
|
Homo sapiens | insufficient | 15 | — |
|
GEO · Long RNA-seq from ENCODE/Cold Spring Harbor Lab
|
Mus musculus | insufficient | 15 | — |
|
GEO · Single-Cell Transcriptome Analysis Maps the Developmental Tr...
|
Homo sapiens | insufficient | 14 | — |
|
GEO · Human Bone Marrow Assessment by Single Cell RNA Sequencing,...
|
Homo sapiens | insufficient | 14 | — |
|
GEO
|
— | insufficient | 14 | — |
|
GEO · Digital gene expression and global mapping of polyadenylatio...
|
Macaca mulatta; Homo sapiens; Canis lupus familiaris; Mus musculus; Rattus norvegicus | insufficient | 13 | — |
|
GEO · RNA-seq of tumor-educated platelets enables blood-based pan-...
|
Homo sapiens | insufficient | 13 | — |
|
GEO · Molecular, Spatial and Functional Single-Cell Profiling of t...
|
Mus musculus | insufficient | 12 | — |
|
GEO · Atlas of RNA sequencing profiles of normal human tissues
|
Homo sapiens | insufficient | 12 | — |
|
GEO
|
— | insufficient | 12 | — |
|
GEO · Global transcriptomic analysis of human pancreatic islets re...
|
Homo sapiens | insufficient | 12 | — |
|
GEO · RNA Sequencing Facilitates Quantitative Analysis of Transcri...
|
Homo sapiens | insufficient | 12 | — |
|
GEO · Transcriptome Landscape of Human Folliculogenesis Reveals Oo...
|
Homo sapiens | insufficient | 11 | — |
|
GEO · Integrated RNA and DNA sequencing reveals early drivers of m...
|
Homo sapiens | insufficient | 11 | — |
|
GEO · Single Cell RNA sequencing of Adult Human Breast Epithelial...
|
Homo sapiens | insufficient | 11 | 1 1✓ |
|
GEO · Tabula Muris
|
Mus musculus | insufficient | 11 | 3 2✓ |
|
GEO · A human cell atlas of fetal gene expression
|
Homo sapiens | insufficient | 11 | — |
|
GEO · Drop-Seq analysis of mixtures of human (HEK) and mouse (3T3)...
|
Homo sapiens; Mus musculus | insufficient | 11 | — |
|
GEO · Transcriptome profiling of 5 human adenocarcinoma cell lines
|
Homo sapiens | insufficient | 11 | — |
|
GEO · Poly(A)-tail profiling reveals an embryonic switch in transl...
|
Arabidopsis thaliana; Schizosaccharomyces pombe; Saccharomyces cerevisiae; Drosophila melanogaster; Danio rerio; Xenopus laevis; | insufficient | 10 | — |
|
GEO · Leucegene: AML sequencing (part 5)
|
Homo sapiens | insufficient | 10 | — |
|
GEO · Tracing the Formation of Haematopoietic Stem Cells in Mouse...
|
Mus musculus | insufficient | 10 | — |
|
GEO
|
— | insufficient | 10 | — |
|
GEO · Single cell RNA sequencing of colorectal cancer with diverse...
|
Homo sapiens | insufficient | 9 | — |
|
GEO · Single-cell transcriptomic atlas of the mouse regenerating m...
|
Mus musculus | insufficient | 9 | — |
|
GEO · A Cell-based Systems Biology Assessment of Human Blood to Mo...
|
Homo sapiens | insufficient | 9 | — |
|
GEO · The Small Molecule ISRIB Reverses the Effects of eIF2α Phosp...
|
Homo sapiens | insufficient | 9 | — |
|
GEO · High gene expression of IL8 in peripheral blood mononuclear...
|
Homo sapiens | insufficient | 8 | — |
|
GEO
|
— | insufficient | 8 | — |
|
GEO · MicroRNA sequence and expression analysis in breast tumors b...
|
Homo sapiens | insufficient | 8 | — |
|
GEO · Impact of regulatory variation from RNA to protein
|
Homo sapiens | insufficient | 8 | — |
|
GEO · Dynamics of lineage commitment revealed by single-cell trans...
|
Mus musculus | insufficient | 8 | — |
|
ENA
|
— | insufficient | 8 | — |
|
GEO · Single-cell RNA sequencing resolves cellular heterogeneity t...
|
Mus musculus | insufficient | 7 | — |