Dataset search
A search engine for scientific quality and reusable datasets: find a dataset, see what it is, how widely it is reused across the literature, and — where our agents have reproduced the papers that use it — whether it holds up. Hands-on, evidence-based, never an unbacked claim.
401 datasets
| Accession | Organism | QC | Reuse (literature) | Studies (✓/⚑) |
|---|---|---|---|---|
|
GEO · Multi-scale 3D genome rewiring during mouse neural developme...
|
Mus musculus | insufficient | 52 | — |
|
GEO · Histone Modifications by ChIP-seq from ENCODE/LICR
|
Mus musculus | insufficient | 35 | — |
|
GEO · Genome-wide maps of chromatin state in pluripotent and linea...
|
Mus musculus | insufficient | 33 | — |
|
GEO · Simple combinations of lineage-determining transcription fac...
|
Mus musculus | insufficient | 23 | 1 1✓ |
|
GEO · ChIP-seq and mRNA-seq experiment to find the direct target g...
|
Mus musculus | insufficient | 16 | 1 1✓ |
|
GEO · Targeted degradation of CTCF decouples local insulation of c...
|
Mus musculus | insufficient | 16 | — |
|
GEO · Master Transcription Factors and Mediator Establish Super-En...
|
Mus musculus | insufficient | 13 | — |
|
GEO · Deciphering the cis-regulatory architecture of mammalian pho...
|
Mus musculus | insufficient | 12 | 1 1✓ |
|
GEO · A global network of transcription factors, involving E2A, EB...
|
Mus musculus | insufficient | 12 | 1 1✓ |
|
GEO · Genome-wide profiling of PPARγ:RXR and RNA polymerase II
|
Mus musculus | insufficient | 11 | — |
|
GEO · Genome-wide distribution and function of ATP-dependent chrom...
|
Mus musculus | insufficient | 11 | — |
|
GEO · Resetting epigenetic memory by reprogramming of histone modi...
|
Mus musculus | insufficient | 11 | — |
|
GEO · 3D structures of individual mammalian genomes reveal princip...
|
Mus musculus | insufficient | 11 | 1 1✓ |
|
GEO · ChIP-Seq of Sox2 and Brn2 in ESCs, NPCs, and differentiating...
|
Mus musculus | insufficient | 10 | — |
|
GEO · Genome-wide map of H3K4me3 in 12 day post-partum mouse sperm...
|
Mus musculus | insufficient | 10 | — |
|
GEO · Identification of in vivo DNA-binding mechanisms of Pax6 and...
|
Mus musculus | insufficient | 10 | — |
|
GEO · Myc regulates chromatin decompaction and nuclear architectur...
|
Mus musculus | insufficient | 10 | — |
|
GEO · Single-cell RNA-seq Uncovers Dynamic Processes and Critical...
|
Mus musculus | insufficient | 9 | — |
|
GEO · Resolving the 3D landscape of transcription-linked mammalian...
|
Mus musculus | insufficient | 9 | — |
|
GEO · Altered Subcellular Localization of Transcription Factor TEA...
|
Mus musculus | insufficient | 9 | 1 1✓ |
|
GEO · Latent enhancers unveiled by stimulation expand and adapt th...
|
Mus musculus | insufficient | 9 | — |
|
GEO · Affinity-seq detects genome-wide PRDM9 binding sites and rev...
|
Mus musculus | insufficient | 9 | — |
|
GEO · Conserved epigenomic signatures between mouse and human eluc...
|
Mus musculus | insufficient | 9 | — |
|
GEO · Cooperative binding of Oct4, Sox2, and Klf4 with stage-speci...
|
Mus musculus | insufficient | 9 | — |
|
GEO · Latent enhancers unveiled by stimulation expand and adapt th...
|
Mus musculus | insufficient | 8 | — |
|
GEO · Re-configuration of Chromatin Structure During the Mitosis-G...
|
Mus musculus | insufficient | 7 | — |
|
GEO · KLF1/EKLF regulatory networks in primary erythroid cells
|
Mus musculus | insufficient | 6 | — |
|
GEO · Diurnal changes of HDAC3, Rev-erbα, NCoR and Pol II recruitm...
|
Mus musculus | insufficient | 6 | — |
|
GEO · NeuroD2 ChIP-SEQ from embryonic cortex
|
Mus musculus | insufficient | 6 | — |
|
GEO · Hierarchy within the mammary STAT5-driven Wap super-enhancer
|
Mus musculus | insufficient | 6 | — |
|
GEO · Mll3 and Mll4 facilitate enhancer RNA synthesis and transcri...
|
Mus musculus | insufficient | 6 | — |
|
GEO · Mechanistic basis of neonatal heart regeneration revealed by...
|
Mus musculus | insufficient | 5 | — |
|
GEO · esBAF is an essential component of the core pluripotency tra...
|
Mus musculus | insufficient | 5 | — |
|
GEO · Identification of Cux2 binding sites in female and male mous...
|
Mus musculus | insufficient | 5 | — |
|
GEO · Epigenetic and genetic features that lead to discovery of en...
|
Mus musculus | insufficient | 5 | — |
|
GEO · Comprehensive analysis of H3K9me2 oocytes, together with DNA...
|
Mus musculus | insufficient | 4 | — |
|
GEO · Coactivator condensation at super-enhancers links phase sepa...
|
Mus musculus | insufficient | 4 | — |
|
GEO · ChIP-seq Accurately Predicts Tissue-Specific Activity of Enh...
|
Mus musculus | insufficient | 4 | 1 1✓ |
|
GEO · Genome-Wide Gli3 Binding Sites in the E11.5 Mouse Limb Bud
|
Mus musculus | insufficient | 3 | — |
|
GEO · Epigenetic and transcriptomic profiling of mammary gland dev...
|
Mus musculus | insufficient | 3 | — |
|
GEO · RNA interactions are essential for proper CTCF function
|
Mus musculus | insufficient | 3 | — |
|
GEO · The stem cell pluripotency genes Klf4 and Oct4 regulate comp...
|
Mus musculus | insufficient | 3 | — |
|
GEO · Polycomb Protein Ezh1 Promotes RNA Polymerase II Elongation
|
Mus musculus | insufficient | 3 | — |
|
GEO · esBAF facilitates pluripotency by conditioning the genome fo...
|
Mus musculus | insufficient | 3 | — |
|
GEO · H3K4 mono- and di-methyltransferase MLL4 is required for enh...
|
Mus musculus | insufficient | 3 | — |
|
GEO · H2A.Z.1 mono-ubiquitylation antagonizes BRD2 to maintain poi...
|
Mus musculus | insufficient | 3 | — |
|
GEO · Stem cell regulatory elements remain bookmarked by selected...
|
Mus musculus | insufficient | 3 | 1 |
|
GEO · Learning and age-related changes in genome-wide H2A.Z bindin...
|
Mus musculus | insufficient | 2 | — |
|
GEO · The Elongation Factor and Histone Chaperone Spt6 Maintains E...
|
Mus musculus | insufficient | 2 | — |
|
GEO · ChIP-Seq in mouse embryonic stem cells of endogenous HA-tagg...
|
Mus musculus | insufficient | 2 | — |
|
GEO · N6-methyladenosine RNA modification regulates embryonic neur...
|
Mus musculus | insufficient | 2 | — |
|
GEO · Spatial genome re-organization between fetal and adult hemat...
|
Mus musculus | insufficient | 2 | — |
|
GEO · Nrf2 ChIP-seq data of Nrf2KO, wild-type and Keap1KO esophagu...
|
Mus musculus | insufficient | 2 | — |
|
GEO · Functional Landscape of PCGF Proteins Reveals Both RING1A/B...
|
Mus musculus | insufficient | 2 | — |
|
GEO · Estrogen receptor-depended gene signatures and ER binding s...
|
Mus musculus | insufficient | 2 | — |
|
GEO · Tissue-resident macrophage enhancer landscapes are shaped by...
|
Mus musculus | insufficient | 2 | — |
|
GEO · The SWI/SNF chromatin remodeling complex is required for lin...
|
Mus musculus | insufficient | 2 | — |
|
GEO · Long non-coding RNAs in B cells
|
Mus musculus | insufficient | 2 | — |
|
GEO · Humanized PRDM9 Mouse Testis H3K4me3 and DMC1 ChIP-seq
|
Mus musculus | insufficient | 2 | — |
|
GEO · An inducible and reversible embryonic stem cell biobank reve...
|
Mus musculus | insufficient | 2 | — |