Dataset search
A search engine for scientific quality and reusable datasets: find a dataset, see what it is, how widely it is reused across the literature, and — where our agents have reproduced the papers that use it — whether it holds up. Hands-on, evidence-based, never an unbacked claim.
3,207 datasets
| Accession | Organism | QC | Reuse (literature) | Studies (✓/⚑) |
|---|---|---|---|---|
|
GEO · Mapping Mouse Cell Atlas by Microwell-seq
|
Homo sapiens; Mus musculus | B 81 | 21 | — |
|
GEO · Reprogramming of Tumor-infiltrating Immune Cells in Early St...
|
Homo sapiens | C 70 | 21 | 1 |
|
GEO · Clonal replacement of tumor-specific T cells following PD-1...
|
Homo sapiens | A 93 | 21 | 1 |
|
GEO · Integrative single-cell chromatin and transcriptome profilin...
|
Homo sapiens; Mus musculus | insufficient | 21 | — |
|
GEO · High throughput quantitative whole transcriptome analysis of...
|
Mus musculus | D 61 | 21 | — |
|
GEO · RNA sequencing (RNA-SEQ) of 21 HBV-HCC patients with non-neo...
|
Homo sapiens | A 100 | 21 | — |
|
BioProject
|
— | A 94 | 21 | — |
|
ENA
|
— | A 100 | 20 | — |
|
GEO · Gene expression profiles of 35 paired HCC and non-tumor tiss...
|
Homo sapiens | C 79 | 20 | — |
|
GEO · The Single Cell Transcriptomic Landscape of Early Human Diab...
|
Homo sapiens | A 100 | 20 | — |
|
GEO · Single-cell RNA sequencing reveals tissue architecture durin...
|
Homo sapiens | F 38 | 20 | — |
|
GEO · Deep RNA Sequencing Reveals Dynamic Regulation of Myocardial...
|
Homo sapiens | A 97 | 20 | — |
|
BioProject
|
— | A 100 | 20 | — |
|
BioProject
|
— | A 100 | 20 | — |
|
BioProject
|
— | B 81 | 20 | — |
|
BioProject
|
— | F 26 | 20 | — |
|
GEO · Comprehensive single cell RNAseq analysis of the kidney reve...
|
Mus musculus | B 83 | 19 | 1 |
|
GEO
|
— | A 100 | 19 | — |
|
GEO · Single-cell transcriptomics analysis of pancreatic primary t...
|
Homo sapiens | A 94 | 19 | — |
|
ENA
|
— | B 89 | 18 | — |
|
GEO · ATAC-seq data
|
Homo sapiens | insufficient | 18 | — |
|
GEO · Single cell analysis of smooth muscle cell phenotypic modula...
|
Homo sapiens | A 100 | 18 | 1 |
|
GEO · Single-cell RNA-seq reveals dynamic paracrine control of cel...
|
Mus musculus | A 90 | 18 | — |
|
BioProject
|
— | A 100 | 18 | 2 1✓ 1⚑ |
|
ENA
|
— | B 84 | 18 | — |
|
GEO · Single-Cell Analysis of Sensory Experience Regulated Gene Ex...
|
Mus musculus | F 20 | 17 | — |
|
GEO · A Single-Cell Atlas of In Vivo Mammalian Chromatin Accessibi...
|
Mus musculus | insufficient | 17 | — |
|
GEO · Single-Cell Whole-Genome Bisulfite Sequencing for Analysis o...
|
Mus musculus | insufficient | 17 | — |
|
BioProject
|
— | A 100 | 17 | — |
|
BioProject
|
— | A 96 | 17 | 1 |
|
GEO · Gene expression profiling in Osteosarcomas
|
Homo sapiens | A 100 | 16 | — |
|
GEO · Understaning mechanisms underlying human gene expression var...
|
Homo sapiens | F 35 | 16 | — |
|
GEO · ChIP-seq and mRNA-seq experiment to find the direct target g...
|
Mus musculus | insufficient | 16 | 1 1✓ |
|
GEO · DNaseI Hypersensitivity by Digital DNaseI from ENCODE/Univer...
|
Mus musculus | insufficient | 16 | — |
|
GEO · Targeted degradation of CTCF decouples local insulation of c...
|
Mus musculus | insufficient | 16 | — |
|
BioProject
|
— | F 54 | 16 | — |
|
BioProject
|
— | F 28 | 16 | — |
|
ENA
|
— | F 47 | 15 | — |
|
GEO · Single-Cell Transcriptome Analysis of Lineage Diversity and...
|
Homo sapiens | A 96 | 15 | 1 |
|
GEO · Comprehensive analysis of Transcriptome Profiles in Hepatoce...
|
Homo sapiens | A 100 | 15 | 1 |
|
GEO
|
— | A 97 | 15 | — |
|
GEO · Genome-wide Analyses of Transcription Factor GATA3-Mediated...
|
Mus musculus | insufficient | 15 | 1 1✓ |
|
GEO · Evolutionary dynamics of gene and isoform regulation in mamm...
|
Gallus gallus; Macaca mulatta; Bos taurus; Mus musculus; Rattus norvegicus | B 88 | 15 | 1 1✓ |
|
BioProject
|
— | A 99 | 15 | — |
|
BioProject
|
— | A 100 | 15 | — |
|
BioProject
|
— | A 97 | 15 | — |
|
GEO · Dissecting cell composition and cell-cell interaction networ...
|
Homo sapiens | B 85 | 14 | — |
|
GEO · Patterns of Population Epigenomic Diversity in Arabidopsis t...
|
Arabidopsis thaliana | insufficient | 14 | — |
|
GEO · A developmental coordinate of the spectrum of pluripotency a...
|
Macaca fascicularis; Mus musculus | F 45 | 14 | — |
|
GEO
|
— | A 96 | 14 | — |
|
BioProject
|
— | F 21 | 14 | — |
|
ENA
|
— | A 100 | 14 | — |
|
ENA
|
— | A 100 | 14 | — |
|
ENA
|
— | B 89 | 13 | — |
|
GEO · Systematic mapping of cell state trajectories, cell lineage,...
|
Danio rerio | B 83 | 13 | — |
|
GEO · Transcription profiles of rectal biopsies obtained during di...
|
Homo sapiens | A 100 | 13 | — |
|
GEO · Context specificity of the EMT transcriptional response
|
Homo sapiens | A 100 | 13 | 1 1⚑ |
|
GEO · DNA specificity determinants associate with distinct transcr...
|
Homo sapiens | insufficient | 13 | — |
|
GEO · Single-cell RNA-seq reveals immune landscape of pancreatic c...
|
Homo sapiens | F 33 | 13 | — |
|
GEO · A comprehensive assessment of RNA-seq accuracy, reproducibil...
|
Homo sapiens; synthetic construct | A 100 | 13 | — |