Dataset search
A search engine for scientific quality and reusable datasets: find a dataset, see what it is, how widely it is reused across the literature, and — where our agents have reproduced the papers that use it — whether it holds up. Hands-on, evidence-based, never an unbacked claim.
55,675 datasets
| Accession | Organism | QC | Reuse (literature) | Studies (✓/⚑) |
|---|---|---|---|---|
|
GEO · Single-cell Map of Diverse Immune Phenotypes in the Breast T...
|
Homo sapiens | insufficient | 21 | — |
|
GEO · Shared and distinct transcriptomic cell types across neocort...
|
Mus musculus | insufficient | 21 | 1 |
|
GEO · Reprogramming of Tumor-infiltrating Immune Cells in Early St...
|
Homo sapiens | C 70 | 21 | 1 |
|
GEO · Clonal replacement of tumor-specific T cells following PD-1...
|
Homo sapiens | A 93 | 21 | 1 |
|
GEO · Single-cell RNA sequencing of human kidney
|
Homo sapiens | insufficient | 21 | — |
|
GEO · High throughput quantitative whole transcriptome analysis of...
|
Mus musculus | D 61 | 21 | — |
|
GEO · RNA sequencing (RNA-SEQ) of 21 HBV-HCC patients with non-neo...
|
Homo sapiens | A 100 | 21 | — |
|
GEO · Gene expression profiles of 35 paired HCC and non-tumor tiss...
|
Homo sapiens | C 79 | 20 | — |
|
GEO · The Single Cell Transcriptomic Landscape of Early Human Diab...
|
Homo sapiens | A 100 | 20 | — |
|
GEO · Multi-omic analysis of subtype evolution and heterogeneity i...
|
Homo sapiens | insufficient | 20 | — |
|
GEO · Single-cell RNA sequencing reveals tissue architecture durin...
|
Homo sapiens | F 38 | 20 | — |
|
GEO · Deep RNA Sequencing Reveals Dynamic Regulation of Myocardial...
|
Homo sapiens | A 97 | 20 | — |
|
GEO · Clinical Value of RNA Sequencing–Based Classifiers for Predi...
|
Homo sapiens | insufficient | 20 | — |
|
GEO · Comprehensive single cell RNAseq analysis of the kidney reve...
|
Mus musculus | B 83 | 19 | 1 |
|
GEO
|
— | A 100 | 19 | — |
|
GEO · Single Cell and Spatial Analysis of Human Squamous Cell Carc...
|
Homo sapiens | insufficient | 19 | — |
|
GEO · Single-cell transcriptomics analysis of pancreatic primary t...
|
Homo sapiens | A 94 | 19 | — |
|
GEO · Single cell analysis of smooth muscle cell phenotypic modula...
|
Homo sapiens | A 100 | 18 | 1 |
|
GEO · Delineating copy number and clonal substructure in human tum...
|
Homo sapiens | insufficient | 18 | — |
|
GEO · Single-cell RNA-seq reveals dynamic paracrine control of cel...
|
Mus musculus | A 90 | 18 | — |
|
GEO · RNA-Seq Identifies Novel Myocardial Gene Expression Signatur...
|
Homo sapiens | insufficient | 18 | — |
|
BioProject
|
— | A 100 | 18 | 2 1✓ 1⚑ |
|
ENA
|
— | B 84 | 18 | — |
|
GEO · Single-Cell Analysis of Sensory Experience Regulated Gene Ex...
|
Mus musculus | F 20 | 17 | — |
|
BioProject
|
— | A 96 | 17 | 1 |
|
GEO · Gene expression profiling in Osteosarcomas
|
Homo sapiens | A 100 | 16 | — |
|
GEO
|
— | insufficient | 16 | — |
|
GEO · Understaning mechanisms underlying human gene expression var...
|
Homo sapiens | F 35 | 16 | — |
|
GEO · Single-Cell Transcriptome Analysis of Lineage Diversity and...
|
Homo sapiens | A 96 | 15 | 1 |
|
GEO · Comprehensive analysis of Transcriptome Profiles in Hepatoce...
|
Homo sapiens | A 100 | 15 | 1 |
|
GEO · Integrated single cell analysis of blood and cerebrospinal f...
|
Homo sapiens | insufficient | 15 | — |
|
GEO
|
— | A 97 | 15 | — |
|
GEO · Long RNA-seq from ENCODE/Cold Spring Harbor Lab
|
Mus musculus | insufficient | 15 | — |
|
GEO · Evolutionary dynamics of gene and isoform regulation in mamm...
|
Gallus gallus; Macaca mulatta; Bos taurus; Mus musculus; Rattus norvegicus | B 88 | 15 | 1 1✓ |
|
BioProject
|
— | A 99 | 15 | — |
|
GEO · Single-Cell Transcriptome Analysis Maps the Developmental Tr...
|
Homo sapiens | insufficient | 14 | — |
|
GEO · Dissecting cell composition and cell-cell interaction networ...
|
Homo sapiens | B 85 | 14 | — |
|
GEO · Human Bone Marrow Assessment by Single Cell RNA Sequencing,...
|
Homo sapiens | insufficient | 14 | — |
|
GEO
|
— | insufficient | 14 | — |
|
GEO · A developmental coordinate of the spectrum of pluripotency a...
|
Macaca fascicularis; Mus musculus | F 45 | 14 | — |
|
GEO
|
— | A 96 | 14 | — |
|
ENA
|
— | A 100 | 14 | — |
|
GEO · Systematic mapping of cell state trajectories, cell lineage,...
|
Danio rerio | B 83 | 13 | — |
|
GEO · Transcription profiles of rectal biopsies obtained during di...
|
Homo sapiens | A 100 | 13 | — |
|
GEO · Context specificity of the EMT transcriptional response
|
Homo sapiens | A 100 | 13 | 1 1⚑ |
|
GEO · Single-cell RNA-seq reveals immune landscape of pancreatic c...
|
Homo sapiens | F 33 | 13 | — |
|
GEO · Digital gene expression and global mapping of polyadenylatio...
|
Macaca mulatta; Homo sapiens; Canis lupus familiaris; Mus musculus; Rattus norvegicus | insufficient | 13 | — |
|
GEO · A comprehensive assessment of RNA-seq accuracy, reproducibil...
|
Homo sapiens; synthetic construct | A 100 | 13 | — |
|
GEO
|
— | C 78 | 13 | — |
|
GEO · Validation of noise models for single-cell transcriptomics
|
Mus musculus | D 60 | 13 | — |
|
GEO · RNA-seq of tumor-educated platelets enables blood-based pan-...
|
Homo sapiens | insufficient | 13 | — |
|
GEO · Single-cell RNA sequencing of lung adenocarcinoma patient-de...
|
Homo sapiens | A 100 | 13 | — |
|
GEO
|
— | A 100 | 13 | — |
|
GEO · Molecular, Spatial and Functional Single-Cell Profiling of t...
|
Mus musculus | insufficient | 12 | — |
|
GEO · Atlas of RNA sequencing profiles of normal human tissues
|
Homo sapiens | insufficient | 12 | — |
|
GEO
|
— | insufficient | 12 | — |
|
GEO · Cellular source and mechanisms of high transcriptome complex...
|
Mus musculus | F 33 | 12 | — |
|
GEO · Global transcriptomic analysis of human pancreatic islets re...
|
Homo sapiens | insufficient | 12 | — |
|
GEO · RNA-seq of human fibroblasts during replicative senescence
|
Homo sapiens | A 100 | 12 | — |
|
GEO · RNA Sequencing Facilitates Quantitative Analysis of Transcri...
|
Homo sapiens | insufficient | 12 | — |