Dataset search
A search engine for scientific quality and reusable datasets: find a dataset, see what it is, how widely it is reused across the literature, and — where our agents have reproduced the papers that use it — whether it holds up. Hands-on, evidence-based, never an unbacked claim.
2,519 datasets
| Accession | Organism | QC | Reuse (literature) | Studies (✓/⚑) |
|---|---|---|---|---|
|
GEO · Single-cell transcriptomics of the human retinal pigment epi...
|
Homo sapiens | F 33 | 10 | — |
|
GEO · RNA-seq from ENCODE/Caltech
|
Homo sapiens | B 82 | 10 | — |
|
GEO · High-throughput sequencing of matched colorectal normal, tum...
|
Homo sapiens | F 58 | 10 | 1 1✓ |
|
GEO · MRI-localized biopsies reveal subtype-specific differences i...
|
Homo sapiens | A 99 | 10 | — |
|
GEO · SLE lupus RNA-seq
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Homo sapiens | A 97 | 10 | — |
|
GEO · Batch effects and the effective design of single-cell gene e...
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Homo sapiens | F 52 | 10 | — |
|
GEO · Single cell RNA-seq data of human hESCs to evaluate Oscope -...
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Homo sapiens | A 95 | 9 | — |
|
GEO · RNA-seq analysis identifies different transcriptomic types a...
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Homo sapiens | B 86 | 8 | — |
|
GEO · Atlas of Subcellular RNA Localization Revealed by APEX-seq
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Homo sapiens | B 85 | 8 | — |
|
GEO · Neonatal and adult human testis defined at the single-cell l...
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Homo sapiens | A 100 | 8 | — |
|
GEO · Molecular profiling stratifies diverse phenotypes of treatme...
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Homo sapiens | A 100 | 8 | — |
|
GEO · Characterizing the tumor microenvironment of metastatic ovar...
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Homo sapiens | A 100 | 8 | — |
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GEO · DNA Methylation by Reduced Representation Bisulfite Seq from...
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Homo sapiens | insufficient | 8 | — |
|
GEO · Comparative profiling of chromatin state maps and transcript...
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Homo sapiens | insufficient | 8 | — |
|
GEO · Transcriptomics profiling of Alzheimer’s disease reveal nove...
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Homo sapiens | A 94 | 8 | — |
|
GEO · MRI-informed muscle biopsies correlate MRI with pathology an...
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Homo sapiens | A 100 | 7 | — |
|
GEO · Pancreas single cell patch-seq links physiologic dysfunction...
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Homo sapiens | A 92 | 7 | — |
|
GEO · A topological atlas reveals layers of genome reorganization...
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Homo sapiens | A 96 | 7 | — |
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GEO · RNA Subcellular CAGE Localization from ENCODE/RIKEN
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Homo sapiens | C 71 | 7 | — |
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GEO · Global loss of DNA methylation uncovers intronic enhancers i...
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Homo sapiens | A 100 | 7 | — |
|
GEO · A blood RNA signature for tuberculosis disease risk: a prosp...
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Homo sapiens | A 100 | 7 | 1 1✓ |
|
GEO · RNA-seq reveals abundant circRNA, lncRNA and mRNA in blood e...
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Homo sapiens | C 78 | 6 | — |
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GEO · Cell hashing enable sample multiplexing, multiplet identific...
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Homo sapiens | A 100 | 6 | — |
|
GEO · Identification of tumor suppressor microRNAs by integrative...
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Homo sapiens | B 83 | 6 | — |
|
GEO · Single cell RNA-seq and ATAC-seq of EMT induced by TGFbeta s...
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Homo sapiens | insufficient | 6 | — |
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GEO · scRNAseq reveals mechanisms of Merkel cell carcinoma acquire...
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Homo sapiens | B 85 | 6 | 1 |
|
GEO · Tracing the first hematopoietic stem cell generation in huma...
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Homo sapiens | F 39 | 6 | — |
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GEO · Single-cell Transcriptomics Identifies Transcriptional Netwo...
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Homo sapiens | F 33 | 6 | — |
|
GEO · Systems biological assessment of immunity to severe and mild...
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Homo sapiens | C 75 | 6 | 1 1✓ |
|
GEO · Replication Timing by Repli-seq from ENCODE/University of Wa...
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Homo sapiens | insufficient | 6 | — |
|
GEO · Transcriptome profiling of human lung cancer cell lines.
|
Homo sapiens | A 99 | 6 | — |
|
GEO · GATA3-mediated chromatin reprogramming in breast cancer cell...
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Homo sapiens | insufficient | 6 | — |
|
GEO · An Atlas of Chromatin Accessibility in the Adult Human Brain
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Homo sapiens | insufficient | 6 | — |
|
GEO · High-throughput RNA sequencing on circular RNA profiles of h...
|
Homo sapiens | C 72 | 6 | — |
|
GEO · Widespread translational remodeling during human neuronal di...
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Homo sapiens | A 95 | 5 | 1 1✓ |
|
GEO · Single-cell RNA-seq analysis reveals the progression of huma...
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Homo sapiens | D 69 | 5 | — |
|
GEO · Human brain tissues from healthy controls and multiple scler...
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Homo sapiens | A 90 | 5 | 1 1✓ |
|
GEO · Dynamic epigenetic enhancer signatures are predictive for ke...
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Homo sapiens | insufficient | 5 | — |
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GEO · Study of Topoisomerase I in human
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Homo sapiens | insufficient | 5 | — |
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GEO · Rapid neurogenesis through transcriptional activation in hum...
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Homo sapiens | F 58 | 5 | — |
|
GEO · Multiplex-NGS for identification of differentially expressed...
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Homo sapiens | B 83 | 5 | 1 1✓ |
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GEO · HER2 expression identifies dynamic functional states within...
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Homo sapiens | B 88 | 5 | — |
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GEO · Single cell profiling of hCS and hSS derived from human iPSC
|
Homo sapiens | A 92 | 5 | — |
|
GEO · Distinct roles of cohesin-SA1 and cohesin-SA2 in 3D chromoso...
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Homo sapiens | insufficient | 4 | — |
|
GEO · High-throughput RNA sequencing on circular RNA profiles of h...
|
Homo sapiens | C 70 | 4 | — |
|
GEO · Kidney compartment specific eQTL studies highlight causal ge...
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Homo sapiens | A 100 | 4 | 1 1✓ |
|
GEO · Transcriptome Analysis of Huh7 cells Infected with Adenoviru...
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Homo sapiens | F 33 | 4 | 1 1⚑ |
|
GEO · Exploring genetic interaction manifolds constructed from ric...
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Homo sapiens | A 96 | 4 | — |
|
GEO · U1 snRNP complex with cleavage and polyadenylation factors c...
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Homo sapiens | C 72 | 4 | — |
|
GEO · Longitudinal multi-omics identifies responses of megakaryocy...
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Homo sapiens | A 94 | 4 | — |
|
GEO · High-Throughput Transcriptomics Platform for Screening Envir...
|
Homo sapiens | B 83 | 4 | — |
|
GEO · The human pancreatic islet transcriptome: impact of pro-infl...
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Homo sapiens | B 83 | 4 | — |
|
GEO · EGFR and MEK pathway signature RNA-Seq datasets
|
Homo sapiens | A 100 | 4 | 1 1✓ |
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GEO · Enhancer Activation Requires Trans-Recruitment of a Mega Tra...
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Homo sapiens | insufficient | 4 | — |
|
GEO · Gene expression profile in breast cancer cell lines using RN...
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Homo sapiens | A 100 | 3 | — |
|
GEO · High-throughput RNA sequencing on circular RNA profiles of h...
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Homo sapiens | B 80 | 3 | — |
|
GEO · Selective Disruption of Core Regulatory Transcription [ChIP-...
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Homo sapiens | insufficient | 3 | — |
|
GEO · ChIP-seq of H3K27ac and CTCF in primary glioblastoma culture...
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Homo sapiens | insufficient | 3 | — |
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GEO · A single cell reference map for human blood and tissue T cel...
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Homo sapiens | B 86 | 3 | — |
|
GEO · Transcriptomic profile of human embryonic renal corpuscles
|
Homo sapiens | A 92 | 3 | — |