Dataset search
A search engine for scientific quality and reusable datasets: find a dataset, see what it is, how widely it is reused across the literature, and — where our agents have reproduced the papers that use it — whether it holds up. Hands-on, evidence-based, never an unbacked claim.
55 datasets
| Accession | Organism | QC | Reuse (literature) | Studies (✓/⚑) |
|---|---|---|---|---|
|
GEO · Single-cell RNA-seq of mouse cerebral cortex
|
Mus musculus | C 76 | 66 | — |
|
GEO · Multi-scale 3D genome rewiring during mouse neural developme...
|
Mus musculus | insufficient | 52 | — |
|
GEO · Single-cell RNA-Seq reveals dynamic, random monoallelic gene...
|
Mus musculus | A 95 | 48 | — |
|
GEO · Histone Modifications by ChIP-seq from ENCODE/LICR
|
Mus musculus | insufficient | 35 | — |
|
GEO · An RNA-Seq transcriptome and splicing database of neurons, g...
|
Mus musculus | A 100 | 35 | — |
|
GEO · Genome-wide maps of chromatin state in pluripotent and linea...
|
Mus musculus | insufficient | 33 | — |
|
GEO · The transcriptional landscape of mouse blood stem/progenitor...
|
Mus musculus | F 32 | 33 | — |
|
GEO · Tabula Muris: Transcriptomic characterization of 20 organs a...
|
Mus musculus | A 91 | 32 | — |
|
GEO · Adult mouse cortical cell taxonomy by single cell transcript...
|
Mus musculus | B 87 | 31 | 1 |
|
GEO · Simple combinations of lineage-determining transcription fac...
|
Mus musculus | insufficient | 23 | 1 1✓ |
|
GEO · Tabula Muris Senis: Bulk sequencing
|
Mus musculus | B 83 | 22 | — |
|
GEO · High throughput quantitative whole transcriptome analysis of...
|
Mus musculus | D 61 | 21 | — |
|
GEO · Comprehensive single cell RNAseq analysis of the kidney reve...
|
Mus musculus | B 83 | 19 | 1 |
|
GEO · Single-cell RNA-seq reveals dynamic paracrine control of cel...
|
Mus musculus | A 90 | 18 | — |
|
GEO · Single-Cell Analysis of Sensory Experience Regulated Gene Ex...
|
Mus musculus | F 20 | 17 | — |
|
GEO · A Single-Cell Atlas of In Vivo Mammalian Chromatin Accessibi...
|
Mus musculus | insufficient | 17 | — |
|
GEO · Single-Cell Whole-Genome Bisulfite Sequencing for Analysis o...
|
Mus musculus | insufficient | 17 | — |
|
GEO · ChIP-seq and mRNA-seq experiment to find the direct target g...
|
Mus musculus | insufficient | 16 | 1 1✓ |
|
GEO · DNaseI Hypersensitivity by Digital DNaseI from ENCODE/Univer...
|
Mus musculus | insufficient | 16 | — |
|
GEO · Targeted degradation of CTCF decouples local insulation of c...
|
Mus musculus | insufficient | 16 | — |
|
GEO · Genome-wide Analyses of Transcription Factor GATA3-Mediated...
|
Mus musculus | insufficient | 15 | 1 1✓ |
|
GEO · Validation of noise models for single-cell transcriptomics
|
Mus musculus | D 60 | 13 | — |
|
GEO · Deciphering the cis-regulatory architecture of mammalian pho...
|
Mus musculus | insufficient | 12 | 1 1✓ |
|
GEO · A global network of transcription factors, involving E2A, EB...
|
Mus musculus | insufficient | 12 | 1 1✓ |
|
GEO · Cellular source and mechanisms of high transcriptome complex...
|
Mus musculus | F 33 | 12 | — |
|
GEO · Genome-wide profiling of PPARγ:RXR and RNA polymerase II
|
Mus musculus | insufficient | 11 | — |
|
GEO · Resetting epigenetic memory by reprogramming of histone modi...
|
Mus musculus | insufficient | 11 | — |
|
GEO · 3D structures of individual mammalian genomes reveal princip...
|
Mus musculus | insufficient | 11 | 1 1✓ |
|
GEO · Genome-wide map of H3K4me3 in 12 day post-partum mouse sperm...
|
Mus musculus | insufficient | 10 | — |
|
GEO · Identification of in vivo DNA-binding mechanisms of Pax6 and...
|
Mus musculus | insufficient | 10 | — |
|
GEO · Drop-Seq analysis of P17 FACS sorted retinal cells from the...
|
Mus musculus | D 68 | 10 | 1 1✓ |
|
GEO · Single-cell RNA-seq Uncovers Dynamic Processes and Critical...
|
Mus musculus | insufficient | 9 | — |
|
GEO · Altered Subcellular Localization of Transcription Factor TEA...
|
Mus musculus | insufficient | 9 | 1 1✓ |
|
GEO · Drop-Seq analysis of P14 mouse retina single-cell suspension
|
Mus musculus | F 50 | 9 | — |
|
GEO · Conserved epigenomic signatures between mouse and human eluc...
|
Mus musculus | insufficient | 9 | — |
|
GEO · Recruitment of Rod Photoreceptors from Short Wavelength Sens...
|
Mus musculus | B 88 | 9 | — |
|
GEO · Single-cell mRNA sequencing of TAC-model mouse heart tissue
|
Mus musculus | A 99 | 8 | — |
|
GEO · Analysis of Pro-Inflammatory Gene Activation and RNA Process...
|
Mus musculus | F 52 | 8 | — |
|
GEO · Identification of the tumour transition states occurring dur...
|
Mus musculus | A 96 | 7 | — |
|
GEO · Landscape of intercellular crosstalk in fatty liver disease...
|
Mus musculus | C 70 | 7 | — |
|
GEO · Combination of high-dimensional approaches for skeletal musc...
|
Mus musculus | F 43 | 6 | — |
|
GEO · Single cell RNA-sequencing reveals cellular heterogeneity an...
|
Mus musculus | A 94 | 6 | — |
|
GEO · Diurnal changes of HDAC3, Rev-erbα, NCoR and Pol II recruitm...
|
Mus musculus | insufficient | 6 | — |
|
GEO · NeuroD2 ChIP-SEQ from embryonic cortex
|
Mus musculus | insufficient | 6 | — |
|
GEO · Hierarchy within the mammary STAT5-driven Wap super-enhancer
|
Mus musculus | insufficient | 6 | — |
|
GEO · Establishing Chromatin Regulatory Landscape during Mouse Pre...
|
Mus musculus | insufficient | 6 | — |
|
GEO · Mll3 and Mll4 facilitate enhancer RNA synthesis and transcri...
|
Mus musculus | insufficient | 6 | — |
|
GEO · Paired-cell sequencing enables spatial gene expression mappi...
|
Mus musculus | C 71 | 5 | — |
|
GEO · Single cell transcriptomic analysis of the lateral hypothala...
|
Mus musculus | C 74 | 5 | — |
|
GEO · esBAF is an essential component of the core pluripotency tra...
|
Mus musculus | insufficient | 5 | — |
|
GEO · Identification of Cux2 binding sites in female and male mous...
|
Mus musculus | insufficient | 5 | — |
|
GEO · Single-cell transcriptomics reveals widespread heterogeneity...
|
Mus musculus | A 97 | 5 | — |
|
GEO · Epigenetic and genetic features that lead to discovery of en...
|
Mus musculus | insufficient | 5 | — |
|
GEO · Transcriptomic profiling maps anatomically patterned subpopu...
|
Mus musculus | B 80 | 5 | — |
|
GEO · Single-cell mapping of lineage and identity in direct reprog...
|
Mus musculus | A 100 | 5 | — |